mirror of https://github.com/msberends/AMR.git
68 lines
3.0 KiB
YAML
68 lines
3.0 KiB
YAML
# from https://stackoverflow.com/questions/51866926
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# and https://github.com/jangorecki/r.gitlab.ci
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# how the images work: https://hub.docker.com/r/rocker/r-ver/
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stages:
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- build
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- deploy
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R 3.3:
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image: rocker/r-ver:3.3 # rocker/r-base
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stage: build
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script:
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- apt-get update
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# install dependencies for package
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- apt-get install --yes --no-install-recommends libxml2-dev libssl-dev libcurl4-openssl-dev zlib1g-dev
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- R -e 'install.packages(c("devtools", "rlang"))'
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- R -e 'devtools::install_deps(dependencies = c("Depends", "Imports", "Suggests"))'
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- R -e 'print(as.data.frame(installed.packages(), row.names = FALSE)[, c("Package", "Version")])'
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# remove vignettes folder and get VignetteBuilder field out of DESCRIPTION file
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- rm -rf vignettes
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- R -e 'd <- read.dcf("DESCRIPTION"); d[, colnames(d) == "VignetteBuilder"] <- NA; write.dcf(d, "DESCRIPTION")'
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- R CMD build . --no-build-vignettes --no-manual
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- PKG_FILE_NAME=$(ls -1t *.tar.gz | head -n 1)
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- R CMD check "${PKG_FILE_NAME}" --no-build-vignettes --no-manual --as-cran
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R 3.4:
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image: rocker/r-ver:3.4 # rocker/r-base
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stage: build
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script:
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- apt-get update
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# install dependencies for package
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- apt-get install --yes --no-install-recommends libxml2-dev libssl-dev libcurl4-openssl-dev zlib1g-dev
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- R -e 'install.packages("devtools")'
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- R -e 'devtools::install_deps(dependencies = c("Depends", "Imports", "Suggests"))'
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- R -e 'print(as.data.frame(installed.packages(), row.names = FALSE)[, c("Package", "Version")])'
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# remove vignettes folder and get VignetteBuilder field out of DESCRIPTION file
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- rm -rf vignettes
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- R -e 'd <- read.dcf("DESCRIPTION"); d[, colnames(d) == "VignetteBuilder"] <- NA; write.dcf(d, "DESCRIPTION")'
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- R CMD build . --no-build-vignettes --no-manual
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- PKG_FILE_NAME=$(ls -1t *.tar.gz | head -n 1)
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- R CMD check "${PKG_FILE_NAME}" --no-build-vignettes --no-manual --as-cran
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R 3.5:
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image: rocker/r-ver:3.5 # rocker/r-base
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stage: build
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script:
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- apt-get update
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# install dependencies for package
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- apt-get install --yes --no-install-recommends libxml2-dev libssl-dev libcurl4-openssl-dev zlib1g-dev
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- R -e 'install.packages("devtools")'
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- R -e 'devtools::install_deps(dependencies = c("Depends", "Imports", "Suggests"))'
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- R -e 'print(as.data.frame(installed.packages(), row.names = FALSE)[, c("Package", "Version")])'
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# remove vignettes folder and get VignetteBuilder field out of DESCRIPTION file
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- rm -rf vignettes
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- R -e 'd <- read.dcf("DESCRIPTION"); d[, colnames(d) == "VignetteBuilder"] <- NA; write.dcf(d, "DESCRIPTION")'
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- R CMD build . --no-build-vignettes --no-manual
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- PKG_FILE_NAME=$(ls -1t *.tar.gz | head -n 1)
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- R CMD check "${PKG_FILE_NAME}" --no-build-vignettes --no-manual --as-cran
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coverage_job:
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stage: deploy
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script:
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# update code coverage
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- apt-get install --yes git
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- R -e "covr::codecov(token = '50ffa0aa-fee0-4f8b-a11d-8c7edc6d32ca')"
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when: on_success
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