mirror of https://github.com/msberends/AMR.git
24 lines
1.1 KiB
R
24 lines
1.1 KiB
R
% Generated by roxygen2: do not edit by hand
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% Please edit documentation in R/portion.R
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\name{rsi}
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\alias{rsi}
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\title{Calculate resistance of isolates}
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\usage{
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rsi(ab1, ab2 = NULL, interpretation = "IR", minimum = 30,
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as_percent = FALSE, ...)
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}
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\arguments{
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\item{ab1, ab2}{vector (or column) with antibiotic interpretations. It will be transformed internally with \code{\link{as.rsi}} if needed.}
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\item{interpretation}{antimicrobial interpretation to check for}
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\item{minimum}{minimal amount of available isolates. Any number lower than \code{minimum} will return \code{NA} with a warning. The default number of \code{30} isolates is advised by the Clinical and Laboratory Standards Institute (CLSI) as best practice, see Source.}
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\item{as_percent}{logical to indicate whether the output must be returned as a hundred fold with \% sign (a character). A value of \code{0.123456} will then be returned as \code{"12.3\%"}.}
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\item{...}{deprecated parameters to support usage on older versions}
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}
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\description{
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This function is deprecated. Use the \code{\link{portion}} functions instead.
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}
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