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Code Releases Activity
AMR/R
History
dr. M.S. (Matthijs) Berends 5e6bbdf3d1
(v2.1.1.9267) update ATCs
2025-05-01 11:48:49 +02:00
..
aa_amr-package.R
(v2.1.1.9260) fix antibiogram
2025-04-29 16:15:18 +02:00
aa_globals.R
(v2.1.1.9247) CLSI/EUCAST 2025!
2025-04-20 12:55:31 +02:00
aa_helper_functions.R
(v2.1.1.9260) fix antibiogram
2025-04-29 16:15:18 +02:00
aa_helper_pm_functions.R
(v2.1.1.9236) documentation
2025-04-12 11:46:42 +02:00
aa_options.R
(v2.1.1.9236) documentation
2025-04-12 11:46:42 +02:00
ab_from_text.R
(v2.1.1.9236) documentation
2025-04-12 11:46:42 +02:00
ab_property.R
(v2.1.1.9236) documentation
2025-04-12 11:46:42 +02:00
ab.R
(v2.1.1.9256) unit tests
2025-04-26 21:29:50 +02:00
age.R
(v2.1.1.9236) documentation
2025-04-12 11:46:42 +02:00
amr_selectors.R
(v2.1.1.9236) documentation
2025-04-12 11:46:42 +02:00
antibiogram.R
(v2.1.1.9267) update ATCs
2025-05-01 11:48:49 +02:00
atc_online.R
(v2.1.1.9236) documentation
2025-04-12 11:46:42 +02:00
av_from_text.R
(v2.1.1.9236) documentation
2025-04-12 11:46:42 +02:00
av_property.R
(v2.1.1.9236) documentation
2025-04-12 11:46:42 +02:00
av.R
(v2.1.1.9236) documentation
2025-04-12 11:46:42 +02:00
availability.R
(v2.1.1.9236) documentation
2025-04-12 11:46:42 +02:00
bug_drug_combinations.R
(v2.1.1.9236) documentation
2025-04-12 11:46:42 +02:00
count.R
(v2.1.1.9236) documentation
2025-04-12 11:46:42 +02:00
custom_antimicrobials.R
(v2.1.1.9236) documentation
2025-04-12 11:46:42 +02:00
custom_eucast_rules.R
(v2.1.1.9236) documentation
2025-04-12 11:46:42 +02:00
custom_microorganisms.R
(v2.1.1.9236) documentation
2025-04-12 11:46:42 +02:00
data.R
(v2.1.1.9267) update ATCs
2025-05-01 11:48:49 +02:00
disk.R
(v2.1.1.9236) documentation
2025-04-12 11:46:42 +02:00
eucast_rules.R
new WISCA vignette
2025-04-30 17:33:03 +02:00
export_biosample.R
(v2.1.1.9236) documentation
2025-04-12 11:46:42 +02:00
first_isolate.R
(v2.1.1.9236) documentation
2025-04-12 11:46:42 +02:00
g.test.R
(v2.1.1.9236) documentation
2025-04-12 11:46:42 +02:00
get_episode.R
(v2.1.1.9236) documentation
2025-04-12 11:46:42 +02:00
ggplot_pca.R
(v2.1.1.9236) documentation
2025-04-12 11:46:42 +02:00
ggplot_sir.R
(v2.1.1.9236) documentation
2025-04-12 11:46:42 +02:00
guess_ab_col.R
(v2.1.1.9252) fix MIC for >= and <=
2025-04-25 10:19:40 +02:00
italicise_taxonomy.R
(v2.1.1.9236) documentation
2025-04-12 11:46:42 +02:00
join_microorganisms.R
(v2.1.1.9236) documentation
2025-04-12 11:46:42 +02:00
key_antimicrobials.R
(v2.1.1.9236) documentation
2025-04-12 11:46:42 +02:00
kurtosis.R
(v2.1.1.9236) documentation
2025-04-12 11:46:42 +02:00
like.R
(v2.1.1.9236) documentation
2025-04-12 11:46:42 +02:00
mdro.R
(v2.1.1.9236) documentation
2025-04-12 11:46:42 +02:00
mean_amr_distance.R
(v2.1.1.9236) documentation
2025-04-12 11:46:42 +02:00
mic.R
(v2.1.1.9247) CLSI/EUCAST 2025!
2025-04-20 12:55:31 +02:00
mo_matching_score.R
(v2.1.1.9236) documentation
2025-04-12 11:46:42 +02:00
mo_property.R
(v2.1.1.9236) documentation
2025-04-12 11:46:42 +02:00
mo_source.R
(v2.1.1.9236) documentation
2025-04-12 11:46:42 +02:00
mo.R
(v2.1.1.9236) documentation
2025-04-12 11:46:42 +02:00
pca.R
(v2.1.1.9236) documentation
2025-04-12 11:46:42 +02:00
plotting.R
(v2.1.1.9252) fix MIC for >= and <=
2025-04-25 10:19:40 +02:00
proportion.R
(v2.1.1.9236) documentation
2025-04-12 11:46:42 +02:00
random.R
(v2.1.1.9236) documentation
2025-04-12 11:46:42 +02:00
resistance_predict.R
(v2.1.1.9237) clean-up
2025-04-13 09:59:40 +02:00
sir_calc.R
(v2.1.1.9236) documentation
2025-04-12 11:46:42 +02:00
sir_df.R
(v2.1.1.9236) documentation
2025-04-12 11:46:42 +02:00
sir.R
(v2.1.1.9267) update ATCs
2025-05-01 11:48:49 +02:00
skewness.R
(v2.1.1.9236) documentation
2025-04-12 11:46:42 +02:00
sysdata.rda
(v2.1.1.9267) update ATCs
2025-05-01 11:48:49 +02:00
top_n_microorganisms.R
(v2.1.1.9253) parallel computing
2025-04-26 15:47:00 +02:00
translate.R
(v2.1.1.9236) documentation
2025-04-12 11:46:42 +02:00
vctrs.R
(v2.1.1.9236) documentation
2025-04-12 11:46:42 +02:00
whocc.R
(v2.1.1.9236) documentation
2025-04-12 11:46:42 +02:00
zz_deprecated.R
(v2.1.1.9240) fix sir interpretation
2025-04-16 15:22:12 +02:00
zzz.R
(v2.1.1.9253) parallel computing
2025-04-26 15:47:00 +02:00