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aa_amr-package.R
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(v2.1.1.9081) HUGE microorganisms update for fungi!
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2024-09-29 22:17:56 +02:00 |
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aa_globals.R
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(v2.1.1.9148) scale fix, antibiogram fix
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2025-02-15 12:38:29 +01:00 |
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aa_helper_functions.R
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(v2.1.1.9137) examples fix
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2025-01-31 16:28:06 +01:00 |
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aa_helper_pm_functions.R
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(v2.1.1.9064) update all microbial taxonomy, add mycobank, big documentation update
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2024-07-16 14:53:17 +02:00 |
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aa_options.R
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(v2.1.1.9078) 12 new formatting formats for antibiogram(), prepare for Bayesian WISCA
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2024-09-22 11:45:51 +02:00 |
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ab_from_text.R
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(v2.1.1.9064) update all microbial taxonomy, add mycobank, big documentation update
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2024-07-16 14:53:17 +02:00 |
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ab_property.R
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(v2.1.1.9079) fix for uti in as.sir()
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2024-09-24 15:34:12 +02:00 |
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ab.R
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(v2.1.1.9136) console colours, updated Suggests, added as.ab() improvement
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2025-01-31 16:01:52 +01:00 |
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age.R
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(v2.1.1.9064) update all microbial taxonomy, add mycobank, big documentation update
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2024-07-16 14:53:17 +02:00 |
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amr_selectors.R
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(v2.1.1.9151) update readme
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2025-02-15 20:53:12 +01:00 |
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antibiogram.R
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(v2.1.1.9151) update readme
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2025-02-15 20:53:12 +01:00 |
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atc_online.R
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(v2.1.1.9064) update all microbial taxonomy, add mycobank, big documentation update
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2024-07-16 14:53:17 +02:00 |
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av_from_text.R
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(v2.1.1.9064) update all microbial taxonomy, add mycobank, big documentation update
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2024-07-16 14:53:17 +02:00 |
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av_property.R
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(v2.1.1.9079) fix for uti in as.sir()
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2024-09-24 15:34:12 +02:00 |
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av.R
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(v2.1.1.9064) update all microbial taxonomy, add mycobank, big documentation update
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2024-07-16 14:53:17 +02:00 |
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availability.R
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(v2.1.1.9064) update all microbial taxonomy, add mycobank, big documentation update
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2024-07-16 14:53:17 +02:00 |
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bug_drug_combinations.R
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(v2.1.1.9129) unit test fix
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2025-01-27 16:17:03 +01:00 |
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count.R
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(v2.1.1.9064) update all microbial taxonomy, add mycobank, big documentation update
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2024-07-16 14:53:17 +02:00 |
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custom_antimicrobials.R
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(v2.1.1.9125) replace 'antibiotic selectors' with 'antimicrobial selectors'
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2025-01-17 12:09:39 +01:00 |
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custom_eucast_rules.R
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(v2.1.1.9064) update all microbial taxonomy, add mycobank, big documentation update
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2024-07-16 14:53:17 +02:00 |
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custom_microorganisms.R
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(v2.1.1.9079) fix for uti in as.sir()
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2024-09-24 15:34:12 +02:00 |
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data.R
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(v2.1.1.9081) HUGE microorganisms update for fungi!
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2024-09-29 22:17:56 +02:00 |
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disk.R
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(v2.1.1.9095) Python support
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2024-10-15 17:12:55 +02:00 |
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eucast_rules.R
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(v2.1.1.9142) unit test fix
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2025-02-07 19:03:02 +01:00 |
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export_biosample.R
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(v2.1.1.9064) update all microbial taxonomy, add mycobank, big documentation update
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2024-07-16 14:53:17 +02:00 |
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first_isolate.R
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(v2.1.1.9141) new AMR selectors, eucast overwrite arg
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2025-02-07 18:01:22 +01:00 |
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g.test.R
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(v2.1.1.9064) update all microbial taxonomy, add mycobank, big documentation update
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2024-07-16 14:53:17 +02:00 |
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get_episode.R
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(v2.1.1.9064) update all microbial taxonomy, add mycobank, big documentation update
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2024-07-16 14:53:17 +02:00 |
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ggplot_pca.R
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(v2.1.1.9131) implement testthat
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2025-01-27 21:43:10 +01:00 |
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ggplot_sir.R
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(v2.1.1.9147) scale fixes and WISCA update, fix conserved capped values
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2025-02-14 14:16:46 +01:00 |
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guess_ab_col.R
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(v2.1.1.9125) replace 'antibiotic selectors' with 'antimicrobial selectors'
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2025-01-17 12:09:39 +01:00 |
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italicise_taxonomy.R
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(v2.1.1.9064) update all microbial taxonomy, add mycobank, big documentation update
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2024-07-16 14:53:17 +02:00 |
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join_microorganisms.R
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(v2.1.1.9064) update all microbial taxonomy, add mycobank, big documentation update
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2024-07-16 14:53:17 +02:00 |
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key_antimicrobials.R
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(v2.1.1.9064) update all microbial taxonomy, add mycobank, big documentation update
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2024-07-16 14:53:17 +02:00 |
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kurtosis.R
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(v2.1.1.9064) update all microbial taxonomy, add mycobank, big documentation update
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2024-07-16 14:53:17 +02:00 |
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like.R
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(v2.1.1.9064) update all microbial taxonomy, add mycobank, big documentation update
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2024-07-16 14:53:17 +02:00 |
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mdro.R
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(v2.1.1.9121) support tidymodels
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2024-12-19 20:17:15 +01:00 |
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mean_amr_distance.R
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(v2.1.1.9125) replace 'antibiotic selectors' with 'antimicrobial selectors'
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2025-01-17 12:09:39 +01:00 |
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mic.R
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(v2.1.1.9152) MIC plot fix
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2025-02-18 08:07:02 +01:00 |
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mo_matching_score.R
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(v2.1.1.9133) update math formulae
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2025-01-27 22:43:35 +01:00 |
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mo_property.R
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(v2.1.1.9082) algorithm updates
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2024-09-30 18:46:55 +02:00 |
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mo_source.R
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(v2.1.1.9125) replace 'antibiotic selectors' with 'antimicrobial selectors'
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2025-01-17 12:09:39 +01:00 |
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mo.R
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(v2.1.1.9136) console colours, updated Suggests, added as.ab() improvement
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2025-01-31 16:01:52 +01:00 |
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pca.R
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(v2.1.1.9064) update all microbial taxonomy, add mycobank, big documentation update
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2024-07-16 14:53:17 +02:00 |
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plotting.R
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(v2.1.1.9152) MIC plot fix
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2025-02-18 08:07:02 +01:00 |
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proportion.R
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(v2.1.1.9140) WISCA fix
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2025-02-05 20:48:35 +01:00 |
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random.R
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(v2.1.1.9064) update all microbial taxonomy, add mycobank, big documentation update
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2024-07-16 14:53:17 +02:00 |
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resistance_predict.R
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(v2.1.1.9064) update all microbial taxonomy, add mycobank, big documentation update
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2024-07-16 14:53:17 +02:00 |
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sir_calc.R
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(v2.1.1.9095) Python support
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2024-10-15 17:12:55 +02:00 |
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sir_df.R
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(v2.1.1.9064) update all microbial taxonomy, add mycobank, big documentation update
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2024-07-16 14:53:17 +02:00 |
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sir.R
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(v2.1.1.9147) scale fixes and WISCA update, fix conserved capped values
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2025-02-14 14:16:46 +01:00 |
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skewness.R
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(v2.1.1.9064) update all microbial taxonomy, add mycobank, big documentation update
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2024-07-16 14:53:17 +02:00 |
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sysdata.rda
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(v2.1.1.9147) scale fixes and WISCA update, fix conserved capped values
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2025-02-14 14:16:46 +01:00 |
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top_n_microorganisms.R
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(v2.1.1.9129) unit test fix
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2025-01-27 16:17:03 +01:00 |
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translate.R
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(v2.1.1.9079) fix for uti in as.sir()
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2024-09-24 15:34:12 +02:00 |
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vctrs.R
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(v2.1.1.9125) replace 'antibiotic selectors' with 'antimicrobial selectors'
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2025-01-17 12:09:39 +01:00 |
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whocc.R
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(v2.1.1.9064) update all microbial taxonomy, add mycobank, big documentation update
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2024-07-16 14:53:17 +02:00 |
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zz_deprecated.R
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(v2.1.1.9125) replace 'antibiotic selectors' with 'antimicrobial selectors'
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2025-01-17 12:09:39 +01:00 |
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zzz.R
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(v2.1.1.9147) scale fixes and WISCA update, fix conserved capped values
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2025-02-14 14:16:46 +01:00 |
