mirror of https://github.com/msberends/AMR.git
49 lines
2.1 KiB
R
49 lines
2.1 KiB
R
# ==================================================================== #
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# TITLE #
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# Antimicrobial Resistance (AMR) Analysis #
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# #
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# AUTHORS #
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# Berends MS (m.s.berends@umcg.nl), Luz CF (c.f.luz@umcg.nl) #
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# #
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# LICENCE #
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# This program is free software; you can redistribute it and/or modify #
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# it under the terms of the GNU General Public License version 2.0, #
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# as published by the Free Software Foundation. #
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# #
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# This program is distributed in the hope that it will be useful, #
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# but WITHOUT ANY WARRANTY; without even the implied warranty of #
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# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the #
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# GNU General Public License for more details. #
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# ==================================================================== #
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# No export, no Rd
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"%like%" <- function(vector, pattern) {
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# Source: https://github.com/Rdatatable/data.table/blob/master/R/like.R
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if (is.factor(vector)) {
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as.integer(vector) %in% grep(pattern, levels(vector))
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} else {
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grepl(pattern, vector)
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}
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}
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percent <- function(x, round = 1, ...) {
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base::paste0(base::round(x * 100, digits = round), "%")
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}
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quasiquotate <- function(deparsed, parsed) {
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# when text: remove first and last "
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if (any(deparsed %like% '^".+"$' | deparsed %like% "^'.+'$")) {
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deparsed <- deparsed %>% substr(2, nchar(.) - 1)
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}
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# apply if needed
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if (any(!deparsed %like% '[[$:()]'
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& !deparsed %in% c('""', "''", "", # empty text
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".", ".data", # dplyr references
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"TRUE", "FALSE", # logicals
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"NA", "NaN", "NULL", # empty values
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ls(.GlobalEnv)))) {
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deparsed
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} else {
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parsed
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}
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} |