This website requires JavaScript.
Explore
Help
Sign In
⚠️
SERVICE NOTICE: This instance will be decommissioned 1 december of this year (2026). Please migrate your projects to our new repository:
https://gitrepo.service.rug.nl
P281424
/
AMR
Watch
1
Star
0
Fork
0
mirror of
https://github.com/msberends/AMR.git
synced
2026-09-21 01:10:55 +02:00
Code
Releases
Activity
Files
705956858188793c2d61e5e8727ed4da3e3720d6
AMR
/
R
T
History
dr. M.S. (Matthijs) Berends
7059568581
fix scale functions
2023-12-03 16:51:54 +01:00
..
aa_amr-package.R
v2.1.1
2023-10-22 15:51:27 +02:00
aa_globals.R
scientific notation for MICs
2023-10-20 15:45:00 +02:00
aa_helper_functions.R
add
scale_x_mic()
2023-12-03 01:06:00 +01:00
aa_helper_pm_functions.R
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
aa_options.R
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
ab_from_text.R
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
ab_property.R
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
ab_selectors.R
Remove RSI from package, add extra MIC scale functions
2023-12-03 11:34:48 +01:00
ab.R
mouse-hover fixes
2023-07-12 15:27:43 +01:00
age.R
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
antibiogram.R
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
atc_online.R
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
av_from_text.R
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
av_property.R
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
av.R
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
availability.R
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
bug_drug_combinations.R
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
count.R
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
custom_antimicrobials.R
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
custom_eucast_rules.R
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
custom_microorganisms.R
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
data.R
prepare for CRAN
2023-10-20 14:51:48 +02:00
disk.R
cleanup
2023-07-11 14:29:40 +02:00
eucast_rules.R
Remove RSI from package, add extra MIC scale functions
2023-12-03 11:34:48 +01:00
first_isolate.R
Remove RSI from package, add extra MIC scale functions
2023-12-03 11:34:48 +01:00
g.test.R
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
get_episode.R
prepare for CRAN
2023-10-20 14:51:48 +02:00
ggplot_pca.R
Remove RSI from package, add extra MIC scale functions
2023-12-03 11:34:48 +01:00
ggplot_sir.R
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
guess_ab_col.R
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
italicise_taxonomy.R
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
join_microorganisms.R
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
key_antimicrobials.R
Remove RSI from package, add extra MIC scale functions
2023-12-03 11:34:48 +01:00
kurtosis.R
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
like.R
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
mdro.R
Remove RSI from package, add extra MIC scale functions
2023-12-03 11:34:48 +01:00
mean_amr_distance.R
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
mic.R
Remove RSI from package, add extra MIC scale functions
2023-12-03 11:34:48 +01:00
mo_matching_score.R
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
mo_property.R
reftbl in plots, speedup for as.sir() and mo_validate
2023-07-10 16:43:46 +02:00
mo_source.R
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
mo.R
mouse-hover fixes
2023-07-12 15:27:43 +01:00
pca.R
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
plot.R
fix scale functions
2023-12-03 16:51:54 +01:00
proportion.R
prepare for CRAN
2023-10-20 14:51:48 +02:00
random.R
Remove RSI from package, add extra MIC scale functions
2023-12-03 11:34:48 +01:00
resistance_predict.R
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
sir_calc.R
Remove RSI from package, add extra MIC scale functions
2023-12-03 11:34:48 +01:00
sir_df.R
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
sir.R
Remove RSI from package, add extra MIC scale functions
2023-12-03 11:34:48 +01:00
skewness.R
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
sysdata.rda
add
scale_x_mic()
2023-12-03 01:06:00 +01:00
translate.R
prepare for CRAN
2023-10-20 14:51:48 +02:00
vctrs.R
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
whocc.R
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
zz_deprecated.R
Remove RSI from package, add extra MIC scale functions
2023-12-03 11:34:48 +01:00
zzz.R
Remove RSI from package, add extra MIC scale functions
2023-12-03 11:34:48 +01:00