dr. M.S. (Matthijs) Berends 70a7ba0206 fix first isolate

2023-02-10 13:13:17 +01:00

..

aa_amr-package.R

sort sir history

2023-01-23 15:01:21 +01:00

aa_globals.R

revert back to pre-antibiogram

2023-02-09 13:07:39 +01:00

aa_helper_functions.R

revert back to pre-antibiogram

2023-02-09 13:07:39 +01:00

aa_helper_pm_functions.R

revert back to pre-antibiogram

2023-02-09 13:07:39 +01:00

aa_options.R

add all options to documentation

2023-01-23 20:07:57 +01:00

ab_from_text.R

documentation, file permissions

2023-01-19 12:54:53 +01:00

ab_property.R

revert back to pre-antibiogram

2023-02-09 13:07:39 +01:00

ab_selectors.R

revert back to pre-antibiogram

2023-02-09 13:07:39 +01:00

ab.R

sort sir history

2023-01-23 15:01:21 +01:00

age.R

sort sir history

2023-01-23 15:01:21 +01:00

antibiogram.R.bak

revert back to pre-antibiogram

2023-02-09 13:07:39 +01:00

atc_online.R

revert back to pre-antibiogram

2023-02-09 13:07:39 +01:00

av_from_text.R

sort sir history

2023-01-23 15:01:21 +01:00

av_property.R

revert back to pre-antibiogram

2023-02-09 13:07:39 +01:00

av.R

sort sir history

2023-01-23 15:01:21 +01:00

availability.R

Replace RSI with SIR

2023-01-21 23:47:20 +01:00

bug_drug_combinations.R

revert back to pre-antibiogram

2023-02-09 13:07:39 +01:00

count.R

Replace RSI with SIR

2023-01-21 23:47:20 +01:00

custom_antimicrobials.R

add all options to documentation

2023-01-23 20:07:57 +01:00

custom_eucast_rules.R

sort sir history

2023-01-23 15:01:21 +01:00

custom_microorganisms.R

add all options to documentation

2023-01-23 20:07:57 +01:00

data.R

revert back to pre-antibiogram

2023-02-09 13:07:39 +01:00

disk.R

revert back to pre-antibiogram

2023-02-09 13:07:39 +01:00

eucast_rules.R

revert back to pre-antibiogram

2023-02-09 13:07:39 +01:00

first_isolate.R

fix first isolate

2023-02-10 13:13:17 +01:00

g.test.R

prelim fix for g.test

2023-01-30 12:26:48 +01:00

get_episode.R

fix first isolate

2023-02-10 13:13:17 +01:00

ggplot_pca.R

sort sir history

2023-01-23 15:01:21 +01:00

ggplot_sir.R

revert back to pre-antibiogram

2023-02-09 13:07:39 +01:00

guess_ab_col.R

sort sir history

2023-01-23 15:01:21 +01:00

italicise_taxonomy.R

sort sir history

2023-01-23 15:01:21 +01:00

join_microorganisms.R

revert back to pre-antibiogram

2023-02-09 13:07:39 +01:00

key_antimicrobials.R

Replace RSI with SIR

2023-01-21 23:47:20 +01:00

kurtosis.R

support new mo codes

2022-12-27 15:16:15 +01:00

like.R

support new mo codes

2022-12-27 15:16:15 +01:00

mdro.R

sort sir history

2023-01-23 15:01:21 +01:00

mean_amr_distance.R

revert back to pre-antibiogram

2023-02-09 13:07:39 +01:00

mic.R

revert back to pre-antibiogram

2023-02-09 13:07:39 +01:00

mo_matching_score.R

sort sir history

2023-01-23 15:01:21 +01:00

mo_property.R

revert back to pre-antibiogram

2023-02-09 13:07:39 +01:00

mo_source.R

add all options to documentation

2023-01-23 20:07:57 +01:00

mo.R

revert back to pre-antibiogram

2023-02-09 13:07:39 +01:00

pca.R

revert back to pre-antibiogram

2023-02-09 13:07:39 +01:00

plot.R

revert back to pre-antibiogram

2023-02-09 13:07:39 +01:00

proportion.R

revert back to pre-antibiogram

2023-02-09 13:07:39 +01:00

random.R

revert back to pre-antibiogram

2023-02-09 13:07:39 +01:00

resistance_predict.R

revert back to pre-antibiogram

2023-02-09 13:07:39 +01:00

sir_calc.R

revert back to pre-antibiogram

2023-02-09 13:07:39 +01:00

sir_df.R

Replace RSI with SIR

2023-01-21 23:47:20 +01:00

sir.R

revert back to pre-antibiogram

2023-02-09 13:07:39 +01:00

skewness.R

support new mo codes

2022-12-27 15:16:15 +01:00

sysdata.rda

use dplyr where available, new antibiogram() for WISCA, fixed Salmonella Typhi/Paratyphi

2023-02-06 11:57:22 +01:00

translate.R

revert back to pre-antibiogram

2023-02-09 13:07:39 +01:00

vctrs.R

Replace RSI with SIR

2023-01-21 23:47:20 +01:00

whocc.R

support new mo codes

2022-12-27 15:16:15 +01:00

zz_deprecated.R

documentation, unit tests

2023-01-24 10:20:27 +01:00

zzz.R

revert back to pre-antibiogram

2023-02-09 13:07:39 +01:00