mirror of https://github.com/msberends/AMR.git
45 lines
2.3 KiB
R
45 lines
2.3 KiB
R
# ==================================================================== #
|
|
# TITLE #
|
|
# Antimicrobial Resistance (AMR) Analysis #
|
|
# #
|
|
# SOURCE #
|
|
# https://gitlab.com/msberends/AMR #
|
|
# #
|
|
# LICENCE #
|
|
# (c) 2019 Berends MS (m.s.berends@umcg.nl), Luz CF (c.f.luz@umcg.nl) #
|
|
# #
|
|
# This R package is free software; you can freely use and distribute #
|
|
# it for both personal and commercial purposes under the terms of the #
|
|
# GNU General Public License version 2.0 (GNU GPL-2), as published by #
|
|
# the Free Software Foundation. #
|
|
# #
|
|
# This R package was created for academic research and was publicly #
|
|
# released in the hope that it will be useful, but it comes WITHOUT #
|
|
# ANY WARRANTY OR LIABILITY. #
|
|
# Visit our website for more info: https://msberends.gitab.io/AMR. #
|
|
# ==================================================================== #
|
|
|
|
# context("mo_history.R")
|
|
#
|
|
# test_that("mo_history works", {
|
|
# clean_mo_history(force = TRUE)
|
|
# expect_equal(read_mo_history(force = TRUE),
|
|
# NULL)
|
|
#
|
|
# expect_equal(as.character(suppressWarnings(as.mo("testsubject"))), "UNKNOWN")
|
|
#
|
|
# set_mo_history("testsubject", "B_ESCHR_COL",
|
|
# uncertainty_level = translate_allow_uncertain(TRUE),
|
|
# force = TRUE)
|
|
#
|
|
# expect_equal(get_mo_history("testsubject",
|
|
# uncertainty_level = translate_allow_uncertain(TRUE),
|
|
# force = TRUE),
|
|
# "B_ESCHR_COL")
|
|
#
|
|
# expect_equal(as.character(as.mo("testsubject", force_mo_history = TRUE)), "B_ESCHR_COL")
|
|
#
|
|
# expect_equal(colnames(read_mo_history(force = TRUE)),
|
|
# c("x", "mo", "uncertainty_level", "package_v"))
|
|
# })
|