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<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9036</small>
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How to
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<a class="dropdown-item" href="articles/AMR.html">
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<span class="fa fa-directions"></span>
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Conduct AMR Analysis
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<a class="dropdown-item" href="reference/antibiogram.html">
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Generate Antibiogram (Trad./Syndromic/WISCA)
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Set User- Or Team-specific Package Settings
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Conduct Principal Component Analysis for AMR
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Determine Multi-Drug Resistance (MDR)
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Apply Eucast Rules
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Get Taxonomy of a Microorganism
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Get Properties of an Antibiotic Drug
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Get Properties of an Antiviral Drug
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AMR & dplyr/tidyverse
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AMR & data.table
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AMR & base R
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Source Code
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<img src="logo.svg" class="logo" alt=""><h1>Authors and Citation</h1>
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<div class="section level2 citation">
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<h2>Authors</h2>
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<ul class="list-unstyled"><li>
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<p><strong>Matthijs S. Berends</strong>. Author, maintainer. <a href="https://orcid.org/0000-0001-7620-1800" target="orcid.widget" aria-label="ORCID" class="external-link"><span class="fab fa-orcid orcid" aria-hidden="true"></span></a>
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</p>
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</li>
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<li>
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<p><strong>Dennis Souverein</strong>. Author, contributor. <a href="https://orcid.org/0000-0003-0455-0336" target="orcid.widget" aria-label="ORCID" class="external-link"><span class="fab fa-orcid orcid" aria-hidden="true"></span></a>
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</p>
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</li>
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<li>
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<p><strong>Erwin E. A. Hassing</strong>. Author, contributor.
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</p>
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</li>
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<li>
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<p><strong>Casper J. Albers</strong>. Thesis advisor. <a href="https://orcid.org/0000-0002-9213-6743" target="orcid.widget" aria-label="ORCID" class="external-link"><span class="fab fa-orcid orcid" aria-hidden="true"></span></a>
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</p>
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</li>
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<li>
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<p><strong>Peter Dutey-Magni</strong>. Contributor. <a href="https://orcid.org/0000-0002-8942-9836" target="orcid.widget" aria-label="ORCID" class="external-link"><span class="fab fa-orcid orcid" aria-hidden="true"></span></a>
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</p>
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</li>
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<li>
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<p><strong>Judith M. Fonville</strong>. Contributor.
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</p>
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</li>
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<li>
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<p><strong>Alex W. Friedrich</strong>. Thesis advisor. <a href="https://orcid.org/0000-0003-4881-038X" target="orcid.widget" aria-label="ORCID" class="external-link"><span class="fab fa-orcid orcid" aria-hidden="true"></span></a>
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</p>
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</li>
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<li>
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<p><strong>Corinna Glasner</strong>. Thesis advisor. <a href="https://orcid.org/0000-0003-1241-1328" target="orcid.widget" aria-label="ORCID" class="external-link"><span class="fab fa-orcid orcid" aria-hidden="true"></span></a>
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</p>
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</li>
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<li>
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<p><strong>Eric H. L. C. M. Hazenberg</strong>. Contributor.
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</p>
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</li>
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<li>
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<p><strong>Gwen Knight</strong>. Contributor. <a href="https://orcid.org/0000-0002-7263-9896" target="orcid.widget" aria-label="ORCID" class="external-link"><span class="fab fa-orcid orcid" aria-hidden="true"></span></a>
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</p>
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</li>
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<li>
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<p><strong>Annick Lenglet</strong>. Contributor. <a href="https://orcid.org/0000-0003-2013-8405" target="orcid.widget" aria-label="ORCID" class="external-link"><span class="fab fa-orcid orcid" aria-hidden="true"></span></a>
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</p>
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</li>
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<li>
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<p><strong>Christian F. Luz</strong>. Contributor. <a href="https://orcid.org/0000-0001-5809-5995" target="orcid.widget" aria-label="ORCID" class="external-link"><span class="fab fa-orcid orcid" aria-hidden="true"></span></a>
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</p>
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</li>
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<li>
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<p><strong>Bart C. Meijer</strong>. Contributor.
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</p>
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</li>
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<li>
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<p><strong>Dmytro Mykhailenko</strong>. Contributor.
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</p>
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</li>
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<li>
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<p><strong>Anton Mymrikov</strong>. Contributor.
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</p>
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</li>
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<li>
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<p><strong>Andrew P. Norgan</strong>. Contributor. <a href="https://orcid.org/0000-0002-2955-2066" target="orcid.widget" aria-label="ORCID" class="external-link"><span class="fab fa-orcid orcid" aria-hidden="true"></span></a>
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</p>
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</li>
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<li>
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<p><strong>Sofia Ny</strong>. Contributor. <a href="https://orcid.org/0000-0002-2017-1363" target="orcid.widget" aria-label="ORCID" class="external-link"><span class="fab fa-orcid orcid" aria-hidden="true"></span></a>
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</p>
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</li>
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<li>
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<p><strong>Matthew Saab</strong>. Contributor.
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</p>
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</li>
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<li>
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<p><strong>Jonas Salm</strong>. Contributor.
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</p>
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</li>
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<li>
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<p><strong>Javier Sanchez</strong>. Contributor. <a href="https://orcid.org/0000-0003-2605-8094" target="orcid.widget" aria-label="ORCID" class="external-link"><span class="fab fa-orcid orcid" aria-hidden="true"></span></a>
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</p>
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</li>
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<li>
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<p><strong>Rogier P. Schade</strong>. Contributor.
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</p>
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</li>
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<li>
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<p><strong>Bhanu N. M. Sinha</strong>. Thesis advisor. <a href="https://orcid.org/0000-0003-1634-0010" target="orcid.widget" aria-label="ORCID" class="external-link"><span class="fab fa-orcid orcid" aria-hidden="true"></span></a>
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</p>
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||
</li>
|
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<li>
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<p><strong>Jason Stull</strong>. Contributor. <a href="https://orcid.org/0000-0002-9028-8153" target="orcid.widget" aria-label="ORCID" class="external-link"><span class="fab fa-orcid orcid" aria-hidden="true"></span></a>
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||
</p>
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||
</li>
|
||
<li>
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<p><strong>Anthony Underwood</strong>. Contributor. <a href="https://orcid.org/0000-0002-8547-4277" target="orcid.widget" aria-label="ORCID" class="external-link"><span class="fab fa-orcid orcid" aria-hidden="true"></span></a>
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||
</p>
|
||
</li>
|
||
<li>
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<p><strong>Anita Williams</strong>. Contributor. <a href="https://orcid.org/0000-0002-5295-8451" target="orcid.widget" aria-label="ORCID" class="external-link"><span class="fab fa-orcid orcid" aria-hidden="true"></span></a>
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||
</p>
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||
</li>
|
||
</ul></div>
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<div class="section level2 citation">
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<h2 id="citation">Citation</h2>
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<p><small class="dont-index">Source: <a href="https://github.com/msberends/AMR/blob/HEAD/inst/CITATION" class="external-link"><code>inst/CITATION</code></a></small></p>
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<p>Berends MS, Luz CF, Friedrich AW, Sinha BNM, Albers CJ, Glasner C (2022).
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“AMR: An R Package for Working with Antimicrobial Resistance Data.”
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<em>Journal of Statistical Software</em>, <b>104</b>(3), 1–31.
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<a href="https://doi.org/10.18637/jss.v104.i03" class="external-link">doi:10.18637/jss.v104.i03</a>.
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</p>
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<pre>@Article{,
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title = {{AMR}: An {R} Package for Working with Antimicrobial Resistance Data},
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author = {Matthijs S. Berends and Christian F. Luz and Alexander W. Friedrich and Bhanu N. M. Sinha and Casper J. Albers and Corinna Glasner},
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journal = {Journal of Statistical Software},
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year = {2022},
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volume = {104},
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number = {3},
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pages = {1--31},
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doi = {10.18637/jss.v104.i03},
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}</pre>
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<p><code>AMR</code> (for R). Free and open-source, licenced under the <a target="_blank" href="https://github.com/msberends/AMR/blob/main/LICENSE" class="external-link">GNU General Public License version 2.0 (GPL-2)</a>.<br>Developed at the <a target="_blank" href="https://www.rug.nl" class="external-link">University of Groningen</a> and <a target="_blank" href="https://www.umcg.nl" class="external-link">University Medical Center Groningen</a> in The Netherlands.</p>
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