AMR/tests/testthat/test-join_microorganisms.R

32 lines
1.1 KiB
R
Executable File

context("join_microorganisms.R")
test_that("joins work", {
unjoined <- septic_patients
inner <- septic_patients %>% inner_join_microorganisms()
left <- septic_patients %>% left_join_microorganisms()
semi <- septic_patients %>% semi_join_microorganisms()
anti <- septic_patients %>% anti_join_microorganisms()
suppressWarnings(right <- septic_patients %>% right_join_microorganisms())
suppressWarnings(full <- septic_patients %>% full_join_microorganisms())
expect_true(ncol(unjoined) < ncol(inner))
expect_true(nrow(unjoined) == nrow(inner))
expect_true(ncol(unjoined) < ncol(left))
expect_true(nrow(unjoined) == nrow(left))
expect_true(ncol(semi) == ncol(semi))
expect_true(nrow(semi) == nrow(semi))
expect_true(nrow(anti) == 0)
expect_true(nrow(unjoined) < nrow(right))
expect_true(nrow(unjoined) < nrow(full))
expect_equal(nrow(inner_join_microorganisms("ESCCOL")), 1)
expect_equal(nrow(left_join_microorganisms("ESCCOL")), 1)
expect_equal(nrow(semi_join_microorganisms("ESCCOL")), 1)
expect_equal(nrow(anti_join_microorganisms("ESCCOL")), 0)
})