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AMR/data-raw/datasets/microorganisms.groups.txt
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Matthijs BerendsandClaude Opus 5.5 0ca43df459 Update taxonomy of microorganisms (2026-10) (#312) 
* Update taxonomy of microorganisms (2026-10)

Rebuild of the microorganisms data set from COL 2026-04-18 XR, LPSN and BacDive of October 2026
and MycoBank of January 2026, with v3.0.1 as the previous data set: 111,103 records (v3.0.1:
78,679), 0 changed MO codes of existing names, 522 released codes retired (275 to be reviewed).

Script fixes (data-raw/_reproduction_scripts/reproduction_of_microorganisms.R):
- previous data set from the last release; COL read as COL Data Package (NameUsage.tsv)
- keep COL records without authors (a filter on NA dropped them, e.g. Balamuthia mandrillaris)
- genus homonyms: unclassified MycoBank entries are not authoritative; the released domain of a
  genus wins if a source supports it (e.g. Moorella, Serpula, Pirella stay Bacteria)
- protect current names of relevant species instead of whole current genera (data set tripled)
- current names and synonyms only within the same domain and for known names (Brugia -> Lycoperdon)
- MycoBank names in Latin script only; old records outside their source's scope become manually added
- Graphium butterflies of v3.0.1 are not carried over, re-added or restored
- restore released taxa by name and rank; retire older cross-domain homonyms for review
- fill empty families from COL and a commented override list (Ascaris, Balamuthia)
- add Brugia malayi and B. timori; remove Salmonella species synonyms that are serovars
- BacDive: a minority of facultative strain records no longer decides (C. difficile)
- translate codes of other data sets with the development version; review unmatched codes
- scope decisions: COL XR names only if relevant or released; Protozoa follow the Fungi rules

Also: all checkpoints (data-raw/taxonomy*.rds), updated data sets, Bartlett et al. list, accessed
dates in TAXONOMY_VERSION, NEWS, two staphylococci added to CoNS, tests updated for real taxonomic
changes, known defects file removed (all solved), and the findings report with all review files in
data-raw/taxonomy_review/2026-10/.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* Taxonomy review report: note on the .dta export and the single commit

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* Fix as.mo() for Salmonella serovars written with the species; add S. xeri to CoNS

- "Salmonella enterica (subsp. enterica) serovar Typhi" returned S. bongori, and
  "S. enterica Typhimurium" S. enterica diarizonae; "Paratyphi A/B/C" became serogroups
- Staphylococcus xeri and S. parequorum confirmed as coagulase-negative

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* Taxonomy build: remove lichens (decision of 5 October 2026)

Fungi in the lichen-forming classes and the order Verrucariales are removed unless their genus is
clinically relevant, with the synonyms that point to them (4,155 records); released lichens are
restored. microorganisms now has 107,126 records (Fungi 45,739); all tests pass.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* Taxonomy review decisions: microsporidia in Fungi, accepted names, missing protozoa

- all microsporidia in the Fungi (1,394 names of v3.0.1 from P_ to F_, old codes translated by name)
- Enterocytozoon bieneusi and Encephalitozoon cuniculi as accepted names (accepted_name_override)
- Balantidium and Isospora added to MO_RELEVANT_GENERA; Cystoisospora belli as synonym of Isospora belli
- synonym cycles decided: Capillidium and Scolecobasidium are the current genera
- removed the stale data-raw/taxonomy_lpsn0.rds
- microorganisms now has 107,253 records; all tests pass

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* Taxonomy review report: all items reviewed

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* Rule matching by accepted taxon; Erysipelatoclostridium as synonym of Thomasclavelia

- interpretive_rules(): species named in a rule (literal names, genus_species/fullname) now also match all other
  names of the same accepted taxon, e.g. 'Clostridium ramosum' for Thomasclavelia ramosa; not for genera or regex rules
- Erysipelatoclostridium and its species are synonyms of Thomasclavelia (accepted_name_override); E. merdavium is
  retired by decision of 6 October 2026, and the build removes taxa retired by a human decision
- microorganisms patched with the same logic as the build script (no full rebuild): 107,252 records
- intrinsic_resistant regenerated with the new taxonomy and rule matching: 308,646 rows
- clinical_breakpoints: EUCAST workbook rows merged again, 24 EUCAST 2026 rows moved from C. ramosum to T. ramosa

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* Taxonomy: correct records for names listed twice, no synonyms without a current name, strict data tests

- one record per name keeps the accepted record (e.g. Eggerthella lenta, Gordonia amarae, Anisakis simplex and
  Enterobius vermicularis were synonyms without a current name), links to dropped records are moved
- LPSN lookup reads the taxonomic status and correct name; validly published synonyms are no longer 'accepted'
- synonyms without a current name: linked via LPSN or removed, released codes retired (3,668); records with kept
  children become 'unknown'; the M. tuberculosis complex is protected (decisions of 7 October 2026)
- subspecies codes reserved, current names of synonyms kept when pruning, missing parent records added or moved,
  higher taxonomy harmonised, shared identifiers resolved per domain and rank, pointers and parent links cleaned
- data sets refer only to current names (except intrinsic_resistant); group members only from current names;
  internal CoNS/CoPS/streptococcal lists keep a synonym only with its current name
- intrinsic_resistant, clinical_breakpoints (EUCAST workbooks) and microorganisms.groups regenerated
- 28 new tests in test-data.R; devtools::test(): 1,581 expectations, 0 failures
- open decisions listed in data-raw/taxonomy_review/2026-10/REPORT.md, section 6

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* Taxonomy: protect WHO priority genera, follow LPSN for the M. tuberculosis complex, place protist groups in one domain

- all taxa of the genera in MO_WHO_PRIORITY_GENERA are protected, also names that are not validly published
  (replaces the hard-coded M. tuberculosis complex; keeps e.g. Klebsiella quasivariicola, M. canettii, M. orygis)
- LPSN is followed for the M. tuberculosis complex: M. bovis, M. africanum, M. caprae, M. microti and M. pinnipedii
  are heterotypic synonyms of M. tuberculosis (Riojas et al. 2018); a test enforces this
- labyrinthulids in the Chromista (Aplanochytrium), Dictydiaethalium in the Protozoa (genus_domain_move), and the
  rank suffix also between domains ('Acantharia {class}' next to the fungal genus Acantharia)
- devtools::test(): 1,582 expectations, 0 failures

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* Taxonomy build no longer depends on the previous build

- intrinsic_resistant is no input of the microorganisms build anymore (it is computed from it); the genera named in
  the interpretive rules are read from the rules instead
- the previous data set no longer makes genera relevant; Debaryomyces added to MO_RELEVANT_GENERA
- new run_after_microorganisms_build.R recreates microorganisms.groups, the EUCAST breakpoints and
  intrinsic_resistant in the right order, and the build runs it at its end
- reproduction_of_intrinsic_resistant.R uses devtools::load_all() instead of the installed package
- effect: 24 never released, not relevant COL records less; devtools::test(): 1,582 expectations, 0 failures

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* Taxonomy review report: summary updated to the second round

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* MO code retirements: mark the 265 reviewed retirements as reviewed

The Graphium and v2.x Protozoa retirements were reviewed and accepted on 6 October 2026 (see the taxonomy review
report, section 5); 'NEEDS REVIEW' is replaced by 'reviewed by Matthijs S. Berends on 2026-10-06'.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
2026-10-07 12:55:12 +02:00

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"mo_group" "mo" "mo_group_name" "mo_name"
"B_ACNTB_BMNN-C" "B_ACNTB_BMNN" "Acinetobacter baumannii complex" "Acinetobacter baumannii"
"B_ACNTB_BMNN-C" "B_ACNTB_CLCC" "Acinetobacter baumannii complex" "Acinetobacter calcoaceticus"
"B_ACNTB_BMNN-C" "B_ACNTB_LCTC" "Acinetobacter baumannii complex" "Acinetobacter lactucae"
"B_ACNTB_BMNN-C" "B_ACNTB_NSCM" "Acinetobacter baumannii complex" "Acinetobacter nosocomialis"
"B_ACNTB_BMNN-C" "B_ACNTB_PITT" "Acinetobacter baumannii complex" "Acinetobacter pittii"
"B_ACNTB_BMNN-C" "B_ACNTB_SFRT" "Acinetobacter baumannii complex" "Acinetobacter seifertii"
"B_BCTRD_FRGL-C" "B_BCTRD_FRGL" "Bacteroides fragilis complex" "Bacteroides fragilis"
"B_BCTRD_FRGL-C" "B_BCTRD_OVTS" "Bacteroides fragilis complex" "Bacteroides ovatus"
"B_BCTRD_FRGL-C" "B_BCTRD_THTT" "Bacteroides fragilis complex" "Bacteroides thetaiotaomicron"
"B_BCTRD_FRGL-C" "B_PRBCT_DSTS" "Bacteroides fragilis complex" "Parabacteroides distasonis"
"B_BCTRD_FRGL-C" "B_PHCCL_VLGT" "Bacteroides fragilis complex" "Phocaeicola vulgatus"
"B_STRPT_HAEM" "B_STRPT_GRPA" "Beta-haemolytic Streptococcus" "Streptococcus Group A"
"B_STRPT_HAEM" "B_STRPT_ABCG" "Beta-haemolytic Streptococcus" "Streptococcus Group A, B, C, G"
"B_STRPT_HAEM" "B_STRPT_GRPB" "Beta-haemolytic Streptococcus" "Streptococcus Group B"
"B_STRPT_HAEM" "B_STRPT_GRPC" "Beta-haemolytic Streptococcus" "Streptococcus Group C"
"B_STRPT_HAEM" "B_STRPT_GRPD" "Beta-haemolytic Streptococcus" "Streptococcus Group D"
"B_STRPT_HAEM" "B_STRPT_GRPE" "Beta-haemolytic Streptococcus" "Streptococcus Group E"
"B_STRPT_HAEM" "B_STRPT_GRPF" "Beta-haemolytic Streptococcus" "Streptococcus Group F"
"B_STRPT_HAEM" "B_STRPT_GRPG" "Beta-haemolytic Streptococcus" "Streptococcus Group G"
"B_STRPT_HAEM" "B_STRPT_GRPH" "Beta-haemolytic Streptococcus" "Streptococcus Group H"
"B_STRPT_HAEM" "B_STRPT_GRPI" "Beta-haemolytic Streptococcus" "Streptococcus Group I"
"B_STRPT_HAEM" "B_STRPT_GRPJ" "Beta-haemolytic Streptococcus" "Streptococcus Group J"
"B_STRPT_HAEM" "B_STRPT_GRPK" "Beta-haemolytic Streptococcus" "Streptococcus Group K"
"B_STRPT_HAEM" "B_STRPT_GRPL" "Beta-haemolytic Streptococcus" "Streptococcus Group L"
"B_STRPT_HAEM" "B_STRPT_AGLC" "Beta-haemolytic Streptococcus" "Streptococcus agalactiae"
"B_STRPT_HAEM" "B_STRPT_ANGN" "Beta-haemolytic Streptococcus" "Streptococcus anginosus"
"B_STRPT_HAEM" "B_STRPT_ANGN_ANGN" "Beta-haemolytic Streptococcus" "Streptococcus anginosus anginosus"
"B_STRPT_HAEM" "B_STRPT_ANGN_WHLY" "Beta-haemolytic Streptococcus" "Streptococcus anginosus whileyi"
"B_STRPT_HAEM" "B_STRPT_BCHS" "Beta-haemolytic Streptococcus" "Streptococcus bouchesdurhonensis"
"B_STRPT_HAEM" "B_STRPT_CANS" "Beta-haemolytic Streptococcus" "Streptococcus canis"
"B_STRPT_HAEM" "B_STRPT_DYSG" "Beta-haemolytic Streptococcus" "Streptococcus dysgalactiae"
"B_STRPT_HAEM" "B_STRPT_DYSG_DYSG" "Beta-haemolytic Streptococcus" "Streptococcus dysgalactiae dysgalactiae"
"B_STRPT_HAEM" "B_STRPT_DYSG_EQSM" "Beta-haemolytic Streptococcus" "Streptococcus dysgalactiae equisimilis"
"B_STRPT_HAEM" "B_STRPT_EQUI" "Beta-haemolytic Streptococcus" "Streptococcus equi"
"B_STRPT_HAEM" "B_STRPT_EQUI_EQUI" "Beta-haemolytic Streptococcus" "Streptococcus equi equi"
"B_STRPT_HAEM" "B_STRPT_EQUI_RMNT" "Beta-haemolytic Streptococcus" "Streptococcus equi ruminatorum"
"B_STRPT_HAEM" "B_STRPT_EQUI_ZPDM" "Beta-haemolytic Streptococcus" "Streptococcus equi zooepidemicus"
"B_STRPT_HAEM" "B_STRPT_PRCN" "Beta-haemolytic Streptococcus" "Streptococcus porcinus"
"B_STRPT_HAEM" "B_STRPT_PYGN" "Beta-haemolytic Streptococcus" "Streptococcus pyogenes"
"B_STRPT_HAEM" "B_STRPT_SLVR" "Beta-haemolytic Streptococcus" "Streptococcus salivarius"
"B_STRPT_HAEM" "B_STRPT_SNGN" "Beta-haemolytic Streptococcus" "Streptococcus sanguinis"
"B_BRKHL_CEPC-C" "B_BRKHL_AMBF" "Burkholderia cepacia complex" "Burkholderia ambifaria"
"B_BRKHL_CEPC-C" "B_BRKHL_ANTH" "Burkholderia cepacia complex" "Burkholderia anthina"
"B_BRKHL_CEPC-C" "B_BRKHL_CNCP" "Burkholderia cepacia complex" "Burkholderia cenocepacia"
"B_BRKHL_CEPC-C" "B_BRKHL_CEPC" "Burkholderia cepacia complex" "Burkholderia cepacia"
"B_BRKHL_CEPC-C" "B_BRKHL_DOLS" "Burkholderia cepacia complex" "Burkholderia dolosa"
"B_BRKHL_CEPC-C" "B_BRKHL_MLTV" "Burkholderia cepacia complex" "Burkholderia multivorans"
"B_BRKHL_CEPC-C" "B_BRKHL_PYRR" "Burkholderia cepacia complex" "Burkholderia pyrrocinia"
"B_BRKHL_CEPC-C" "B_BRKHL_STBL" "Burkholderia cepacia complex" "Burkholderia stabilis"
"B_BRKHL_CEPC-C" "B_BRKHL_UBNN" "Burkholderia cepacia complex" "Burkholderia ubonensis"
"B_BRKHL_CEPC-C" "B_BRKHL_VTNM" "Burkholderia cepacia complex" "Burkholderia vietnamiensis"
"F_CANDD_ALBC-C" "F_CANDD_ALBC" "Candida albicans complex" "Candida albicans"
"F_CANDD_ALBC-C" "F_CANDD_ALBC_ALBC" "Candida albicans complex" "Candida albicans albicans"
"F_CANDD_ALBC-C" "F_CANDD_DBLN" "Candida albicans complex" "Candida dubliniensis"
"F_CANDD_GLBR-C" "F_NKSMY_BRCR" "Candida glabrata complex" "Nakaseomyces bracarensis"
"F_CANDD_GLBR-C" "F_NKSMY_BRTS" "Candida glabrata complex" "Nakaseomyces glabratus"
"F_CANDD_GLBR-C" "F_NKSMY_NVRN" "Candida glabrata complex" "Nakaseomyces nivariensis"
"F_CANDD_PRPS-C" "F_CANDD_MTPS" "Candida parapsilosis complex" "Candida metapsilosis"
"F_CANDD_PRPS-C" "F_CANDD_ORTH" "Candida parapsilosis complex" "Candida orthopsilosis"
"F_CANDD_PRPS-C" "F_CANDD_PRPS" "Candida parapsilosis complex" "Candida parapsilosis"
"P_CHLMS" "F_CANDD_DBSH" "Chilomastix" "Candida duobushaemulonii"
"P_CHLMS" "F_CANDD_HMLN" "Chilomastix" "Candida haemulonii"
"P_CHLMS" "F_CANDD_HMLN-C" "Chilomastix" "Candida haemulonii complex"
"B_CTRBC_AMLN-C" "B_CTRBC_AMLN" "Citrobacter amalonaticus complex" "Citrobacter amalonaticus"
"B_CTRBC_AMLN-C" "B_CTRBC_FRMR" "Citrobacter amalonaticus complex" "Citrobacter farmeri"
"B_CTRBC_AMLN-C" "B_CTRBC_SDLK" "Citrobacter amalonaticus complex" "Citrobacter sedlakii"
"B_CTRBC_FRND-C" "B_CTRBC_BRAK" "Citrobacter freundii complex" "Citrobacter braakii"
"B_CTRBC_FRND-C" "B_CTRBC_FRND" "Citrobacter freundii complex" "Citrobacter freundii"
"B_CTRBC_FRND-C" "B_CTRBC_GLLN" "Citrobacter freundii complex" "Citrobacter gillenii"
"B_CTRBC_FRND-C" "B_CTRBC_MRLN" "Citrobacter freundii complex" "Citrobacter murliniae"
"B_CTRBC_FRND-C" "B_CTRBC_PRTC" "Citrobacter freundii complex" "Citrobacter portucalensis"
"B_CTRBC_FRND-C" "B_CTRBC_SDLK" "Citrobacter freundii complex" "Citrobacter sedlakii"
"B_CTRBC_FRND-C" "B_CTRBC_WRKM" "Citrobacter freundii complex" "Citrobacter werkmanii"
"B_CTRBC_FRND-C" "B_CTRBC_YONG" "Citrobacter freundii complex" "Citrobacter youngae"
"B_STPHY_CONS" "B_STPHY_AMRC" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus americanisciuri"
"B_STPHY_CONS" "B_STPHY_ARGN" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus argensis"
"B_STPHY_CONS" "B_STPHY_ARLT" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus arlettae"
"B_STPHY_CONS" "B_STPHY_ARCL" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus auricularis"
"B_STPHY_CONS" "B_STPHY_BRLS" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus borealis"
"B_STPHY_CONS" "B_STPHY_BRNN" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus brunensis"
"B_STPHY_CONS" "B_STPHY_CAEL" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus caeli"
"B_STPHY_CONS" "B_STPHY_CLDN" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus caledonicus"
"B_STPHY_CONS" "B_STPHY_CANS" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus canis"
"B_STPHY_CONS" "B_STPHY_CPTS" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus capitis"
"B_STPHY_CONS" "B_STPHY_CPTS_CPTS" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus capitis capitis"
"B_STPHY_CONS" "B_STPHY_CPTS_URLY" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus capitis urealyticus"
"B_STPHY_CONS" "B_STPHY_CAPR" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus caprae"
"B_STPHY_CONS" "B_STPHY_CRNS" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus carnosus"
"B_STPHY_CONS" "B_STPHY_CASE" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus casei"
"B_STPHY_CONS" "B_STPHY_CSRM" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus caseorum"
"B_STPHY_CONS" "B_STPHY_CHRM" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus chromogenes"
"B_STPHY_CONS" "B_STPHY_COHN" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus cohnii"
"B_STPHY_CONS" "B_STPHY_CNDM" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus condimenti"
"B_STPHY_CONS" "B_STPHY_CRCL" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus croceilyticus"
"B_STPHY_CONS" "B_STPHY_DBCK" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus debuckii"
"B_STPHY_CONS" "B_STPHY_DVRS" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus devriesei"
"B_STPHY_CONS" "B_STPHY_DRMD" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus dromedarii"
"B_STPHY_CONS" "B_STPHY_DRRL" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus durrellii"
"B_STPHY_CONS" "B_STPHY_EDPH" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus edaphicus"
"B_STPHY_CONS" "B_STPHY_EPDR" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus epidermidis"
"B_STPHY_CONS" "B_STPHY_EQRM" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus equorum"
"B_STPHY_CONS" "B_STPHY_EQRM_EQRM" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus equorum equorum"
"B_STPHY_CONS" "B_STPHY_EQRM_LNNS" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus equorum linens"
"B_STPHY_CONS" "B_STPHY_FELS" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus felis"
"B_STPHY_CONS" "B_STPHY_FLRT" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus fleurettii"
"B_STPHY_CONS" "B_STPHY_GLLN" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus gallinarum"
"B_STPHY_CONS" "B_STPHY_HMLY" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus haemolyticus"
"B_STPHY_CONS" "B_STPHY_HLTL" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus halotolerans"
"B_STPHY_CONS" "B_STPHY_HMNS" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus hominis"
"B_STPHY_CONS" "B_STPHY_HMNS_HMNS" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus hominis hominis"
"B_STPHY_CONS" "B_STPHY_HMNS_NVBS" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus hominis novobiosepticus"
"B_STPHY_CONS" "B_STPHY_HSNC" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus hsinchuensis"
"B_STPHY_CONS" "B_STPHY_KLOS" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus kloosii"
"B_STPHY_CONS" "B_STPHY_LNTS" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus lentus"
"B_STPHY_CONS" "B_STPHY_LLYD" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus lloydii"
"B_STPHY_CONS" "B_STPHY_LGDN" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus lugdunensis"
"B_STPHY_CONS" "B_STPHY_MRYL" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus marylandisciuri"
"B_STPHY_CONS" "B_STPHY_MSSL" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus massiliensis"
"B_STPHY_CONS" "B_STPHY_MCRT" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus microti"
"B_STPHY_CONS" "B_STPHY_MUSC" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus muscae"
"B_STPHY_CONS" "B_STPHY_NPLN" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus nepalensis"
"B_STPHY_CONS" "B_STPHY_PRQR" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus parequorum"
"B_STPHY_CONS" "B_STPHY_PSTR" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus pasteuri"
"B_STPHY_CONS" "B_STPHY_PTRS" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus petrasii"
"B_STPHY_CONS" "B_STPHY_PTTN" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus pettenkoferi"
"B_STPHY_CONS" "B_STPHY_PSCF" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus piscifermentans"
"B_STPHY_CONS" "B_STPHY_PRGN" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus pragensis"
"B_STPHY_CONS" "B_STPHY_PSDX" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus pseudoxylosus"
"B_STPHY_CONS" "B_STPHY_RATT" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus ratti"
"B_STPHY_CONS" "B_STPHY_RSTR" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus rostri"
"B_STPHY_CONS" "B_STPHY_SCCH" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus saccharolyticus"
"B_STPHY_CONS" "B_STPHY_SPRP" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus saprophyticus"
"B_STPHY_CONS" "B_STPHY_SCHL" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus schleiferi"
"B_STPHY_CONS" "B_STPHY_SCIR" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus sciuri"
"B_STPHY_CONS" "B_STPHY_SHIN" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus shinii"
"B_STPHY_CONS" "B_STPHY_SMLN" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus simulans"
"B_STPHY_CONS" "B_STPHY_STPN" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus stepanovicii"
"B_STPHY_CONS" "B_STPHY_SCCN" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus succinus"
"B_STPHY_CONS" "B_STPHY_TWNN" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus taiwanensis"
"B_STPHY_CONS" "B_STPHY_URLY" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus ureilyticus"
"B_STPHY_CONS" "B_STPHY_VTLN" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus vitulinus"
"B_STPHY_CONS" "B_STPHY_WRNR" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus warneri"
"B_STPHY_CONS" "B_STPHY_XERI" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus xeri"
"B_STPHY_CONS" "B_STPHY_XYLS" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus xylosus"
"B_STPHY_COPS" "B_STPHY_AGNT" "Coagulase-positive Staphylococcus (CoPS)" "Staphylococcus agnetis"
"B_STPHY_COPS" "B_STPHY_GNTS" "Coagulase-positive Staphylococcus (CoPS)" "Staphylococcus argenteus"
"B_STPHY_COPS" "B_STPHY_CGLN" "Coagulase-positive Staphylococcus (CoPS)" "Staphylococcus coagulans"
"B_STPHY_COPS" "B_STPHY_CRNB" "Coagulase-positive Staphylococcus (CoPS)" "Staphylococcus cornubiensis"
"B_STPHY_COPS" "B_STPHY_DLPH" "Coagulase-positive Staphylococcus (CoPS)" "Staphylococcus delphini"
"B_STPHY_COPS" "B_STPHY_HYCS" "Coagulase-positive Staphylococcus (CoPS)" "Staphylococcus hyicus"
"B_STPHY_COPS" "B_STPHY_INTR" "Coagulase-positive Staphylococcus (CoPS)" "Staphylococcus intermedius"
"B_STPHY_COPS" "B_STPHY_LUTR" "Coagulase-positive Staphylococcus (CoPS)" "Staphylococcus lutrae"
"B_STPHY_COPS" "B_STPHY_PSDN" "Coagulase-positive Staphylococcus (CoPS)" "Staphylococcus pseudintermedius"
"B_STPHY_COPS" "B_STPHY_SCHW" "Coagulase-positive Staphylococcus (CoPS)" "Staphylococcus schweitzeri"
"B_STPHY_COPS" "B_STPHY_SIMI" "Coagulase-positive Staphylococcus (CoPS)" "Staphylococcus simiae"
"B_STPHY_COPS" "B_STPHY_URSI" "Coagulase-positive Staphylococcus (CoPS)" "Staphylococcus ursi"
"B_CORYNF" "B_ARCNB" "Coryneform bacterium" "Arcanobacterium"
"B_CORYNF" "B_ARCNB_HMLY" "Coryneform bacterium" "Arcanobacterium haemolyticum"
"B_CORYNF" "B_BCTRM" "Coryneform bacterium" "Brevibacterium"
"B_CORYNF" "B_BCTRM_CASE" "Coryneform bacterium" "Brevibacterium casei"
"B_CORYNF" "B_BCTRM_EPDR" "Coryneform bacterium" "Brevibacterium epidermidis"
"B_CORYNF" "B_BCTRM_MCBR" "Coryneform bacterium" "Brevibacterium mcbrellneri"
"B_CORYNF" "B_CLLLM" "Coryneform bacterium" "Cellulomonas"
"B_CORYNF" "B_CLLLSM" "Coryneform bacterium" "Cellulosimicrobium"
"B_CORYNF" "B_CLLLSM_CLLL" "Coryneform bacterium" "Cellulosimicrobium cellulans"
"B_CORYNF" "B_CRYNB" "Coryneform bacterium" "Corynebacterium"
"B_CORYNF" "B_CRYNB_ACCL" "Coryneform bacterium" "Corynebacterium accolens"
"B_CORYNF" "B_CRYNB_AFRM" "Coryneform bacterium" "Corynebacterium afermentans"
"B_CORYNF" "B_CRYNB_AFRM_AFRM" "Coryneform bacterium" "Corynebacterium afermentans afermentans"
"B_CORYNF" "B_CRYNB_AFRM_LPPH" "Coryneform bacterium" "Corynebacterium afermentans lipophilum"
"B_CORYNF" "B_CRYNB_AMYC" "Coryneform bacterium" "Corynebacterium amycolatum"
"B_CORYNF" "B_CRYNB_ARGN" "Coryneform bacterium" "Corynebacterium argentoratense"
"B_CORYNF" "B_CRYNB_ARMC" "Coryneform bacterium" "Corynebacterium aurimucosum"
"B_CORYNF" "B_CRYNB_AURS" "Coryneform bacterium" "Corynebacterium auris"
"B_CORYNF" "B_CRYNB_BOVS" "Coryneform bacterium" "Corynebacterium bovis"
"B_CORYNF" "B_CRYNB_COYL" "Coryneform bacterium" "Corynebacterium coyleae"
"B_CORYNF" "B_CRYNB_CYST" "Coryneform bacterium" "Corynebacterium cystitidis"
"B_CORYNF" "B_CRYNB_DPHT" "Coryneform bacterium" "Corynebacterium diphtheriae"
"B_CORYNF" "B_CRYNB_DPHT_DPHT" "Coryneform bacterium" "Corynebacterium diphtheriae diphtheriae"
"B_CORYNF" "B_CRYNB_DPHT_LSNN" "Coryneform bacterium" "Corynebacterium diphtheriae lausannense"
"B_CORYNF" "B_CRYNB_GLCR" "Coryneform bacterium" "Corynebacterium glucuronolyticum"
"B_CORYNF" "B_CRYNB_GLTM" "Coryneform bacterium" "Corynebacterium glutamicum"
"B_CORYNF" "B_CRYNB_JEKM" "Coryneform bacterium" "Corynebacterium jeikeium"
"B_CORYNF" "B_CRYNB_KTSC" "Coryneform bacterium" "Corynebacterium kutscheri"
"B_CORYNF" "B_CRYNB_MCGN" "Coryneform bacterium" "Corynebacterium macginleyi"
"B_CORYNF" "B_CRYNB_MTRC" "Coryneform bacterium" "Corynebacterium matruchotii"
"B_CORYNF" "B_CRYNB_MNTS" "Coryneform bacterium" "Corynebacterium minutissimum"
"B_CORYNF" "B_CRYNB_MCFC" "Coryneform bacterium" "Corynebacterium mucifaciens"
"B_CORYNF" "B_CRYNB_MYCT" "Coryneform bacterium" "Corynebacterium mycetoides"
"B_CORYNF" "B_CRYNB_OTTD" "Coryneform bacterium" "Corynebacterium otitidis"
"B_CORYNF" "B_CRYNB_PLSM" "Coryneform bacterium" "Corynebacterium pilosum"
"B_CORYNF" "B_CRYNB_PRPN" "Coryneform bacterium" "Corynebacterium propinquum"
"B_CORYNF" "B_CRYNB_PSDD" "Coryneform bacterium" "Corynebacterium pseudodiphtheriticum"
"B_CORYNF" "B_CRYNB_PSDT" "Coryneform bacterium" "Corynebacterium pseudotuberculosis"
"B_CORYNF" "B_CRYNB_RENL" "Coryneform bacterium" "Corynebacterium renale"
"B_CORYNF" "B_CRYNB_STRT" "Coryneform bacterium" "Corynebacterium striatum"
"B_CORYNF" "B_CRYNB_ULCR" "Coryneform bacterium" "Corynebacterium ulcerans"
"B_CORYNF" "B_CRYNB_URLY" "Coryneform bacterium" "Corynebacterium urealyticum"
"B_CORYNF" "B_CRYNB_XRSS" "Coryneform bacterium" "Corynebacterium xerosis"
"B_CORYNF" "B_DRMBC" "Coryneform bacterium" "Dermabacter"
"B_CORYNF" "B_DRMBC_HMNS" "Coryneform bacterium" "Dermabacter hominis"
"B_CORYNF" "B_LEFSN" "Coryneform bacterium" "Leifsonia"
"B_CORYNF" "B_LEFSN_AQTC" "Coryneform bacterium" "Leifsonia aquatica"
"B_CORYNF" "B_MCRBC" "Coryneform bacterium" "Microbacterium"
"B_CORYNF" "B_MCRBC_ARBR" "Coryneform bacterium" "Microbacterium arborescens"
"B_CORYNF" "B_MCRBC_IMPR" "Coryneform bacterium" "Microbacterium imperiale"
"B_CORYNF" "B_MCRBC_LQFC" "Coryneform bacterium" "Microbacterium liquefaciens"
"B_CORYNF" "B_MCRBC_OXYD" "Coryneform bacterium" "Microbacterium oxydans"
"B_CORYNF" "B_ORSKV" "Coryneform bacterium" "Oerskovia"
"B_CORYNF" "B_ORSKV_TRBT" "Coryneform bacterium" "Oerskovia turbata"
"B_CORYNF" "B_ROTHI" "Coryneform bacterium" "Rothia"
"B_CORYNF" "B_ROTHI_DNTC" "Coryneform bacterium" "Rothia dentocariosa"
"B_CORYNF" "B_ROTHI_KRST" "Coryneform bacterium" "Rothia kristinae"
"B_CORYNF" "B_ROTHI_MCLG" "Coryneform bacterium" "Rothia mucilaginosa"
"B_CORYNF" "B_TRPRL" "Coryneform bacterium" "Trueperella"
"B_CORYNF" "B_TRPRL_BRNR" "Coryneform bacterium" "Trueperella bernardiae"
"B_CORYNF" "B_TRPRL_PYGN" "Coryneform bacterium" "Trueperella pyogenes"
"B_ENTRBC_CLOC-C" "B_ENTRBC_ASBR" "Enterobacter cloacae complex" "Enterobacter asburiae"
"B_ENTRBC_CLOC-C" "B_ENTRBC_CLOC" "Enterobacter cloacae complex" "Enterobacter cloacae"
"B_ENTRBC_CLOC-C" "B_ENTRBC_CLOC_CLOC" "Enterobacter cloacae complex" "Enterobacter cloacae cloacae"
"B_ENTRBC_CLOC-C" "B_ENTRBC_CLOC_DSSL" "Enterobacter cloacae complex" "Enterobacter cloacae dissolvens"
"B_ENTRBC_CLOC-C" "B_ENTRBC_HRMC" "Enterobacter cloacae complex" "Enterobacter hormaechei"
"B_ENTRBC_CLOC-C" "B_ENTRBC_HRMC_HFFM" "Enterobacter cloacae complex" "Enterobacter hormaechei hoffmannii"
"B_ENTRBC_CLOC-C" "B_ENTRBC_HRMC_HRMC" "Enterobacter cloacae complex" "Enterobacter hormaechei hormaechei"
"B_ENTRBC_CLOC-C" "B_ENTRBC_HRMC_OHAR" "Enterobacter cloacae complex" "Enterobacter hormaechei oharae"
"B_ENTRBC_CLOC-C" "B_ENTRBC_HRMC_STGR" "Enterobacter cloacae complex" "Enterobacter hormaechei steigerwaltii"
"B_ENTRBC_CLOC-C" "B_ENTRBC_HRMC_XNGF" "Enterobacter cloacae complex" "Enterobacter hormaechei xiangfangensis"
"B_ENTRBC_CLOC-C" "B_ENTRBC_KOBE" "Enterobacter cloacae complex" "Enterobacter kobei"
"B_ENTRBC_CLOC-C" "B_ENTRBC_LDWG" "Enterobacter cloacae complex" "Enterobacter ludwigii"
"B_ENTRBC_CLOC-C" "B_LLLTT_NMPR" "Enterobacter cloacae complex" "Lelliottia nimipressuralis"
"B_HACEK" "B_AGGRG" "Haemophilus, Aggregatibacter, Cardiobacterium, Eikenella, Kingella (HACEK)" "Aggregatibacter"
"B_HACEK" "B_AGGRG_ACTN" "Haemophilus, Aggregatibacter, Cardiobacterium, Eikenella, Kingella (HACEK)" "Aggregatibacter actinomycetemcomitans"
"B_HACEK" "B_AGGRG_APHR" "Haemophilus, Aggregatibacter, Cardiobacterium, Eikenella, Kingella (HACEK)" "Aggregatibacter aphrophilus"
"B_HACEK" "B_AGGRG_KILN" "Haemophilus, Aggregatibacter, Cardiobacterium, Eikenella, Kingella (HACEK)" "Aggregatibacter kilianii"
"B_HACEK" "B_AGGRG_SGNS" "Haemophilus, Aggregatibacter, Cardiobacterium, Eikenella, Kingella (HACEK)" "Aggregatibacter segnis"
"B_HACEK" "B_CRDBC_HMNS" "Haemophilus, Aggregatibacter, Cardiobacterium, Eikenella, Kingella (HACEK)" "Cardiobacterium hominis"
"B_HACEK" "B_EKNLL_CRRD" "Haemophilus, Aggregatibacter, Cardiobacterium, Eikenella, Kingella (HACEK)" "Eikenella corrodens"
"B_HACEK" "B_HMPHL" "Haemophilus, Aggregatibacter, Cardiobacterium, Eikenella, Kingella (HACEK)" "Haemophilus"
"B_HACEK" "B_HMPHL_AEGY" "Haemophilus, Aggregatibacter, Cardiobacterium, Eikenella, Kingella (HACEK)" "Haemophilus aegyptius"
"B_HACEK" "B_HMPHL_DCRY" "Haemophilus, Aggregatibacter, Cardiobacterium, Eikenella, Kingella (HACEK)" "Haemophilus ducreyi"
"B_HACEK" "B_HMPHL_FELS" "Haemophilus, Aggregatibacter, Cardiobacterium, Eikenella, Kingella (HACEK)" "Haemophilus felis"
"B_HACEK" "B_HMPHL_HMLY" "Haemophilus, Aggregatibacter, Cardiobacterium, Eikenella, Kingella (HACEK)" "Haemophilus haemolyticus"
"B_HACEK" "B_HMPHL_INFL" "Haemophilus, Aggregatibacter, Cardiobacterium, Eikenella, Kingella (HACEK)" "Haemophilus influenzae"
"B_HACEK" "B_HMPHL_MSSL" "Haemophilus, Aggregatibacter, Cardiobacterium, Eikenella, Kingella (HACEK)" "Haemophilus massiliensis"
"B_HACEK" "B_HMPHL_PRCN" "Haemophilus, Aggregatibacter, Cardiobacterium, Eikenella, Kingella (HACEK)" "Haemophilus paracuniculus"
"B_HACEK" "B_HMPHL_PRHM" "Haemophilus, Aggregatibacter, Cardiobacterium, Eikenella, Kingella (HACEK)" "Haemophilus parahaemolyticus"
"B_HACEK" "B_HMPHL_PRNF" "Haemophilus, Aggregatibacter, Cardiobacterium, Eikenella, Kingella (HACEK)" "Haemophilus parainfluenzae"
"B_HACEK" "B_HMPHL_PRPH" "Haemophilus, Aggregatibacter, Cardiobacterium, Eikenella, Kingella (HACEK)" "Haemophilus paraphrohaemolyticus"
"B_HACEK" "B_HMPHL_PSCM" "Haemophilus, Aggregatibacter, Cardiobacterium, Eikenella, Kingella (HACEK)" "Haemophilus piscium"
"B_HACEK" "B_HMPHL_PTTM" "Haemophilus, Aggregatibacter, Cardiobacterium, Eikenella, Kingella (HACEK)" "Haemophilus pittmaniae"
"B_HACEK" "B_HMPHL_QNTN" "Haemophilus, Aggregatibacter, Cardiobacterium, Eikenella, Kingella (HACEK)" "Haemophilus quentini"
"B_HACEK" "B_HMPHL_SMNL" "Haemophilus, Aggregatibacter, Cardiobacterium, Eikenella, Kingella (HACEK)" "Haemophilus seminalis"
"B_HACEK" "B_HMPHL_SPTR" "Haemophilus, Aggregatibacter, Cardiobacterium, Eikenella, Kingella (HACEK)" "Haemophilus sputorum"
"B_HACEK" "B_KGLLA" "Haemophilus, Aggregatibacter, Cardiobacterium, Eikenella, Kingella (HACEK)" "Kingella"
"B_HACEK" "B_KGLLA_BNCR" "Haemophilus, Aggregatibacter, Cardiobacterium, Eikenella, Kingella (HACEK)" "Kingella bonacorsii"
"B_HACEK" "B_KGLLA_DNTR" "Haemophilus, Aggregatibacter, Cardiobacterium, Eikenella, Kingella (HACEK)" "Kingella denitrificans"
"B_HACEK" "B_KGLLA_KING" "Haemophilus, Aggregatibacter, Cardiobacterium, Eikenella, Kingella (HACEK)" "Kingella kingae"
"B_HACEK" "B_KGLLA_NGVN" "Haemophilus, Aggregatibacter, Cardiobacterium, Eikenella, Kingella (HACEK)" "Kingella negevensis"
"B_HACEK" "B_KGLLA_ORLS" "Haemophilus, Aggregatibacter, Cardiobacterium, Eikenella, Kingella (HACEK)" "Kingella oralis"
"B_HACEK" "B_KGLLA_POTS" "Haemophilus, Aggregatibacter, Cardiobacterium, Eikenella, Kingella (HACEK)" "Kingella potus"
"B_HACEK" "B_KGLLA_PMCH" "Haemophilus, Aggregatibacter, Cardiobacterium, Eikenella, Kingella (HACEK)" "Kingella pumchi"
"B_KLBSL_PNMN-C" "B_KLBSL_AFRC" "Klebsiella pneumoniae complex" "Klebsiella africana"
"B_KLBSL_PNMN-C" "B_KLBSL_PNMN" "Klebsiella pneumoniae complex" "Klebsiella pneumoniae"
"B_KLBSL_PNMN-C" "B_KLBSL_PNMN_OZAN" "Klebsiella pneumoniae complex" "Klebsiella pneumoniae ozaenae"
"B_KLBSL_PNMN-C" "B_KLBSL_PNMN_PNMN" "Klebsiella pneumoniae complex" "Klebsiella pneumoniae pneumoniae"
"B_KLBSL_PNMN-C" "B_KLBSL_PNMN_RHNS" "Klebsiella pneumoniae complex" "Klebsiella pneumoniae rhinoscleromatis"
"B_KLBSL_PNMN-C" "B_KLBSL_QSPN" "Klebsiella pneumoniae complex" "Klebsiella quasipneumoniae"
"B_KLBSL_PNMN-C" "B_KLBSL_QSPN_QSPN" "Klebsiella pneumoniae complex" "Klebsiella quasipneumoniae quasipneumoniae"
"B_KLBSL_PNMN-C" "B_KLBSL_QSPN_SMLP" "Klebsiella pneumoniae complex" "Klebsiella quasipneumoniae similipneumoniae"
"B_KLBSL_PNMN-C" "B_KLBSL_QSVR" "Klebsiella pneumoniae complex" "Klebsiella quasivariicola"
"B_KLBSL_PNMN-C" "B_KLBSL_VRCL" "Klebsiella pneumoniae complex" "Klebsiella variicola"
"B_KLBSL_PNMN-C" "B_KLBSL_VRCL_TRPC" "Klebsiella pneumoniae complex" "Klebsiella variicola tropica"
"B_KLBSL_PNMN-C" "B_KLBSL_VRCL_VRCL" "Klebsiella pneumoniae complex" "Klebsiella variicola variicola"
"F_MYRZY_GLLR-C" "F_CANDD_FRMN" "Meyerozyma guilliermondii complex" "Candida fermentati"
"F_MYRZY_GLLR-C" "F_MYRZY_CRBB" "Meyerozyma guilliermondii complex" "Meyerozyma caribbica"
"F_MYRZY_GLLR-C" "F_MYRZY_CRPP" "Meyerozyma guilliermondii complex" "Meyerozyma carpophila"
"F_MYRZY_GLLR-C" "F_MYRZY_GLLR" "Meyerozyma guilliermondii complex" "Meyerozyma guilliermondii"
"F_MYRZY_GLLR-C" "F_MYRZY_GLLR_GLLR" "Meyerozyma guilliermondii complex" "Meyerozyma guilliermondii guilliermondii"
"B_MYCBC_AVIM-C" "B_MYCBC_AVIM" "Mycobacterium avium complex" "Mycobacterium avium"
"B_MYCBC_AVIM-C" "B_MYCBC_AVIM_AVIM" "Mycobacterium avium complex" "Mycobacterium avium avium"
"B_MYCBC_AVIM-C" "B_MYCBC_AVIM_PRTB" "Mycobacterium avium complex" "Mycobacterium avium paratuberculosis"
"B_MYCBC_AVIM-C" "B_MYCBC_AVIM_SLVT" "Mycobacterium avium complex" "Mycobacterium avium silvaticum"
"B_MYCBC_AVIM-C" "B_MYCBC_LLRE" "Mycobacterium avium complex" "Mycobacterium intracellulare"
"B_MYCBC_AVIM-C" "B_MYCBC_LLRE_CHMR" "Mycobacterium avium complex" "Mycobacterium intracellulare chimaera"
"B_MYCBC_AVIM-C" "B_MYCBC_LLRE_INTR" "Mycobacterium avium complex" "Mycobacterium intracellulare intracellulare"
"B_MYCBC_TBRC-C" "B_MYCBC_MUNG" "Mycobacterium tuberculosis complex" "Mycobacterium mungi"
"B_MYCBC_TBRC-C" "B_MYCBC_ORYG" "Mycobacterium tuberculosis complex" "Mycobacterium orygis"
"B_MYCBC_TBRC-C" "B_MYCBC_TBRC" "Mycobacterium tuberculosis complex" "Mycobacterium tuberculosis"
"B_PSDMN_FLRS-C" "B_PSDMN_FLRS" "Pseudomonas fluorescens complex" "Pseudomonas fluorescens"
"B_MYCBC_RGM" "B_MYCBC_ABSC_ABSC" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium abscessus abscessus"
"B_MYCBC_RGM" "B_MYCBC_ABSC_BLLT" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium abscessus bolletii"
"B_MYCBC_RGM" "B_MYCBC_ABSC_MSSL" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium abscessus massiliense"
"B_MYCBC_RGM" "B_MYCBC_AGRI" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium agri"
"B_MYCBC_RGM" "B_MYCBC_ACHN" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium aichiense"
"B_MYCBC_RGM" "B_MYCBC_ALGR" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium algericum"
"B_MYCBC_RGM" "B_MYCBC_ALVE" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium alvei"
"B_MYCBC_RGM" "B_MYCBC_ANYN" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium anyangense"
"B_MYCBC_RGM" "B_MYCBC_ARBN" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium arabiense"
"B_MYCBC_RGM" "B_MYCBC_ARMT" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium aromaticivorans"
"B_MYCBC_RGM" "B_MYCBC_ABGN" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium aubagnense"
"B_MYCBC_RGM" "B_MYCBC_AURM" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium aurum"
"B_MYCBC_RGM" "B_MYCBC_ASTR" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium austroafricanum"
"B_MYCBC_RGM" "B_MYCBC_BCTR" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium bacteremicum"
"B_MYCBC_RGM" "B_MYCBC_BNCK" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium boenickei"
"B_MYCBC_RGM" "B_MYCBC_BRGL" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium bourgelatii"
"B_MYCBC_RGM" "B_MYCBC_BRSB" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium brisbanense"
"B_MYCBC_RGM" "B_MYCBC_BRUM" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium brumae"
"B_MYCBC_RGM" "B_MYCBC_CNRS" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium canariasense"
"B_MYCBC_RGM" "B_MYCBC_CLRF" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium celeriflavum"
"B_MYCBC_RGM" "B_MYCBC_CHLN" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium chelonae"
"B_MYCBC_RGM" "B_MYCBC_CHLN_BVST" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium chelonae bovistauri"
"B_MYCBC_RGM" "B_MYCBC_CHLN_CHLN" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium chelonae chelonae"
"B_MYCBC_RGM" "B_MYCBC_CHLN_GWNK" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium chelonae gwanakae"
"B_MYCBC_RGM" "B_MYCBC_CHIT" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium chitae"
"B_MYCBC_RGM" "B_MYCBC_CHLR" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium chlorophenolicum"
"B_MYCBC_RGM" "B_MYCBC_CHBN" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium chubuense"
"B_MYCBC_RGM" "B_MYCBC_CNFL" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium confluentis"
"B_MYCBC_RGM" "B_MYCBC_CSMT" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium cosmeticum"
"B_MYCBC_RGM" "B_MYCBC_CRCN" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium crocinum"
"B_MYCBC_RGM" "B_MYCBC_DRNH" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium diernhoferi"
"B_MYCBC_RGM" "B_MYCBC_DUVL" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium duvalii"
"B_MYCBC_RGM" "B_MYCBC_ELPH" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium elephantis"
"B_MYCBC_RGM" "B_MYCBC_FLLX" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium fallax"
"B_MYCBC_RGM" "B_MYCBC_FLVS" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium flavescens"
"B_MYCBC_RGM" "B_MYCBC_VRNS" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium fluoranthenivorans"
"B_MYCBC_RGM" "B_MYCBC_FRTT" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium fortuitum"
"B_MYCBC_RGM" "B_MYCBC_FRTT_ACTM" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium fortuitum acetamidolyticum"
"B_MYCBC_RGM" "B_MYCBC_FRTT_FRTT" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium fortuitum fortuitum"
"B_MYCBC_RGM" "B_MYCBC_FRNK" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium franklinii"
"B_MYCBC_RGM" "B_MYCBC_FRDR" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium frederiksbergense"
"B_MYCBC_RGM" "B_MYCBC_GADM" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium gadium"
"B_MYCBC_RGM" "B_MYCBC_GLVM" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium gilvum"
"B_MYCBC_RGM" "B_MYCBC_GOOD" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium goodii"
"B_MYCBC_RGM" "B_MYCBC_HSSC" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium hassiacum"
"B_MYCBC_RGM" "B_MYCBC_HPPC" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium hippocampi"
"B_MYCBC_RGM" "B_MYCBC_HDLR" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium hodleri"
"B_MYCBC_RGM" "B_MYCBC_HLST" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium holsaticum"
"B_MYCBC_RGM" "B_MYCBC_HSTN" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium houstonense"
"B_MYCBC_RGM" "B_MYCBC_IMMN" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium immunogenum"
"B_MYCBC_RGM" "B_MYCBC_INSB" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium insubricum"
"B_MYCBC_RGM" "B_MYCBC_IRNC" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium iranicum"
"B_MYCBC_RGM" "B_MYCBC_KMSS" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium komossense"
"B_MYCBC_RGM" "B_MYCBC_LTRL" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium litorale"
"B_MYCBC_RGM" "B_MYCBC_LLTZ" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium llatzerense"
"B_MYCBC_RGM" "B_MYCBC_MDGS" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium madagascariense"
"B_MYCBC_RGM" "B_MYCBC_MGRT" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium mageritense"
"B_MYCBC_RGM" "B_MYCBC_MNCN" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium monacense"
"B_MYCBC_RGM" "B_MYCBC_MRKN" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium moriokaense"
"B_MYCBC_RGM" "B_MYCBC_MCGN" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium mucogenicum"
"B_MYCBC_RGM" "B_MYCBC_MURL" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium murale"
"B_MYCBC_RGM" "B_MYCBC_NERM" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium neoaurum"
"B_MYCBC_RGM" "B_MYCBC_NWRL" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium neworleansense"
"B_MYCBC_RGM" "B_MYCBC_NVCS" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium novocastrense"
"B_MYCBC_RGM" "B_MYCBC_OBNS" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium obuense"
"B_MYCBC_RGM" "B_MYCBC_PLLN" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium pallens"
"B_MYCBC_RGM" "B_MYCBC_PRFR" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium parafortuitum"
"B_MYCBC_RGM" "B_MYCBC_GRNM" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium peregrinum"
"B_MYCBC_RGM" "B_MYCBC_PHLE" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium phlei"
"B_MYCBC_RGM" "B_MYCBC_PHCC" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium phocaicum"
"B_MYCBC_RGM" "B_MYCBC_PRCN" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium porcinum"
"B_MYCBC_RGM" "B_MYCBC_RFRE" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium poriferae"
"B_MYCBC_RGM" "B_MYCBC_PSYC" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium psychrotolerans"
"B_MYCBC_RGM" "B_MYCBC_PYRN" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium pyrenivorans"
"B_MYCBC_RGM" "B_MYCBC_RHDS" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium rhodesiae"
"B_MYCBC_RGM" "B_MYCBC_RUFM" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium rufum"
"B_MYCBC_RGM" "B_MYCBC_RTLM" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium rutilum"
"B_MYCBC_RGM" "B_MYCBC_SLMN" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium salmoniphilum"
"B_MYCBC_RGM" "B_MYCBC_SDMN" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium sediminis"
"B_MYCBC_RGM" "B_MYCBC_SNGL" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium senegalense"
"B_MYCBC_RGM" "B_MYCBC_SPTC" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium septicum"
"B_MYCBC_RGM" "B_MYCBC_STNS" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium setense"
"B_MYCBC_RGM" "B_MYCBC_SMGM" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium smegmatis"
"B_MYCBC_RGM" "B_MYCBC_SPHG" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium sphagni"
"B_MYCBC_RGM" "B_MYCBC_THRM" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium thermoresistibile"
"B_MYCBC_RGM" "B_MYCBC_TKNS" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium tokaiense"
"B_MYCBC_RGM" "B_MYCBC_VACC" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium vaccae"
"B_MYCBC_RGM" "B_MYCBC_WLNS" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium wolinskyi"
"B_MYCBC_SGM" "B_MYCBC_FRCN" "Slowly growing Mycobacterium (SGM)" "Mycobacterium farcinogenes"
"B_MYCBC_SGM" "B_MYCBC_GSTR" "Slowly growing Mycobacterium (SGM)" "Mycobacterium gastri"
"B_MYCBC_SGM" "B_MYCBC_GNVN" "Slowly growing Mycobacterium (SGM)" "Mycobacterium genavense"
"B_MYCBC_SGM" "B_MYCBC_HMPH" "Slowly growing Mycobacterium (SGM)" "Mycobacterium haemophilum"
"B_MYCBC_SGM" "B_MYCBC_KNSS" "Slowly growing Mycobacterium (SGM)" "Mycobacterium kansasii"
"B_MYCBC_SGM" "B_MYCBC_LEPR" "Slowly growing Mycobacterium (SGM)" "Mycobacterium leprae"
"B_MYCBC_SGM" "B_MYCBC_LPRM" "Slowly growing Mycobacterium (SGM)" "Mycobacterium lepraemurium"
"B_MYCBC_SGM" "B_MYCBC_MLMN" "Slowly growing Mycobacterium (SGM)" "Mycobacterium malmoense"
"B_MYCBC_SGM" "B_MYCBC_MRNM" "Slowly growing Mycobacterium (SGM)" "Mycobacterium marinum"
"B_STRPT_GRPA" "B_STRPT_PYGN" "Streptococcus Group A" "Streptococcus pyogenes"
"B_STRPT_ABCG" "B_STRPT_GRPA" "Streptococcus Group A, B, C, G" "Streptococcus Group A"
"B_STRPT_ABCG" "B_STRPT_GRPB" "Streptococcus Group A, B, C, G" "Streptococcus Group B"
"B_STRPT_ABCG" "B_STRPT_GRPC" "Streptococcus Group A, B, C, G" "Streptococcus Group C"
"B_STRPT_ABCG" "B_STRPT_GRPG" "Streptococcus Group A, B, C, G" "Streptococcus Group G"
"B_STRPT_ABCG" "B_STRPT_AGLC" "Streptococcus Group A, B, C, G" "Streptococcus agalactiae"
"B_STRPT_ABCG" "B_STRPT_CANS" "Streptococcus Group A, B, C, G" "Streptococcus canis"
"B_STRPT_ABCG" "B_STRPT_DYSG" "Streptococcus Group A, B, C, G" "Streptococcus dysgalactiae"
"B_STRPT_ABCG" "B_STRPT_DYSG_DYSG" "Streptococcus Group A, B, C, G" "Streptococcus dysgalactiae dysgalactiae"
"B_STRPT_ABCG" "B_STRPT_DYSG_EQSM" "Streptococcus Group A, B, C, G" "Streptococcus dysgalactiae equisimilis"
"B_STRPT_ABCG" "B_STRPT_EQUI" "Streptococcus Group A, B, C, G" "Streptococcus equi"
"B_STRPT_ABCG" "B_STRPT_EQUI_EQUI" "Streptococcus Group A, B, C, G" "Streptococcus equi equi"
"B_STRPT_ABCG" "B_STRPT_EQUI_RMNT" "Streptococcus Group A, B, C, G" "Streptococcus equi ruminatorum"
"B_STRPT_ABCG" "B_STRPT_EQUI_ZPDM" "Streptococcus Group A, B, C, G" "Streptococcus equi zooepidemicus"
"B_STRPT_ABCG" "B_STRPT_PYGN" "Streptococcus Group A, B, C, G" "Streptococcus pyogenes"
"B_STRPT_GRPB" "B_STRPT_AGLC" "Streptococcus Group B" "Streptococcus agalactiae"
"B_STRPT_GRPC" "B_STRPT_DYSG" "Streptococcus Group C" "Streptococcus dysgalactiae"
"B_STRPT_GRPC" "B_STRPT_DYSG_DYSG" "Streptococcus Group C" "Streptococcus dysgalactiae dysgalactiae"
"B_STRPT_GRPC" "B_STRPT_DYSG_EQSM" "Streptococcus Group C" "Streptococcus dysgalactiae equisimilis"
"B_STRPT_GRPC" "B_STRPT_EQUI" "Streptococcus Group C" "Streptococcus equi"
"B_STRPT_GRPC" "B_STRPT_EQUI_EQUI" "Streptococcus Group C" "Streptococcus equi equi"
"B_STRPT_GRPC" "B_STRPT_EQUI_RMNT" "Streptococcus Group C" "Streptococcus equi ruminatorum"
"B_STRPT_GRPC" "B_STRPT_EQUI_ZPDM" "Streptococcus Group C" "Streptococcus equi zooepidemicus"
"B_STRPT_GRPF" "B_STRPT_ANGN" "Streptococcus Group F" "Streptococcus anginosus"
"B_STRPT_GRPF" "B_STRPT_ANGN_ANGN" "Streptococcus Group F" "Streptococcus anginosus anginosus"
"B_STRPT_GRPF" "B_STRPT_ANGN_WHLY" "Streptococcus Group F" "Streptococcus anginosus whileyi"
"B_STRPT_GRPF" "B_STRPT_CNST" "Streptococcus Group F" "Streptococcus constellatus"
"B_STRPT_GRPF" "B_STRPT_CNST_CNST" "Streptococcus Group F" "Streptococcus constellatus constellatus"
"B_STRPT_GRPF" "B_STRPT_CNST_PHRY" "Streptococcus Group F" "Streptococcus constellatus pharyngis"
"B_STRPT_GRPF" "B_STRPT_CNST_VBRG" "Streptococcus Group F" "Streptococcus constellatus viborgensis"
"B_STRPT_GRPF" "B_STRPT_INTR" "Streptococcus Group F" "Streptococcus intermedius"
"B_STRPT_GRPG" "B_STRPT_CANS" "Streptococcus Group G" "Streptococcus canis"
"B_STRPT_GRPG" "B_STRPT_DYSG" "Streptococcus Group G" "Streptococcus dysgalactiae"
"B_STRPT_GRPG" "B_STRPT_DYSG_DYSG" "Streptococcus Group G" "Streptococcus dysgalactiae dysgalactiae"
"B_STRPT_GRPG" "B_STRPT_DYSG_EQSM" "Streptococcus Group G" "Streptococcus dysgalactiae equisimilis"
"B_STRPT_GRPH" "B_STRPT_SNGN" "Streptococcus Group H" "Streptococcus sanguinis"
"B_STRPT_GRPK" "B_STRPT_SLVR" "Streptococcus Group K" "Streptococcus salivarius"
"B_STRPT_GRPL" "B_STRPT_DYSG" "Streptococcus Group L" "Streptococcus dysgalactiae"
"B_STRPT_GRPL" "B_STRPT_DYSG_DYSG" "Streptococcus Group L" "Streptococcus dysgalactiae dysgalactiae"
"B_STRPT_GRPL" "B_STRPT_DYSG_EQSM" "Streptococcus Group L" "Streptococcus dysgalactiae equisimilis"
"B_STRPT_VIRI" "B_STRPT_MILL" "Viridans Group Streptococcus (VGS)" "Milleri Group Streptococcus (MGS)"
"B_STRPT_VIRI" "B_STRPT_GRPI" "Viridans Group Streptococcus (VGS)" "Streptococcus Group I"
"B_STRPT_VIRI" "B_STRPT_ACDM" "Viridans Group Streptococcus (VGS)" "Streptococcus acidominimus"
"B_STRPT_VIRI" "B_STRPT_ANGN" "Viridans Group Streptococcus (VGS)" "Streptococcus anginosus"
"B_STRPT_VIRI" "B_STRPT_ANGN_ANGN" "Viridans Group Streptococcus (VGS)" "Streptococcus anginosus anginosus"
"B_STRPT_VIRI" "B_STRPT_ANGN_WHLY" "Viridans Group Streptococcus (VGS)" "Streptococcus anginosus whileyi"
"B_STRPT_VIRI" "B_STRPT_CNST" "Viridans Group Streptococcus (VGS)" "Streptococcus constellatus"
"B_STRPT_VIRI" "B_STRPT_CNST_CNST" "Viridans Group Streptococcus (VGS)" "Streptococcus constellatus constellatus"
"B_STRPT_VIRI" "B_STRPT_CNST_PHRY" "Viridans Group Streptococcus (VGS)" "Streptococcus constellatus pharyngis"
"B_STRPT_VIRI" "B_STRPT_CNST_VBRG" "Viridans Group Streptococcus (VGS)" "Streptococcus constellatus viborgensis"
"B_STRPT_VIRI" "B_STRPT_CRCT" "Viridans Group Streptococcus (VGS)" "Streptococcus criceti"
"B_STRPT_VIRI" "B_STRPT_CRST" "Viridans Group Streptococcus (VGS)" "Streptococcus cristatus"
"B_STRPT_VIRI" "B_STRPT_DOWN" "Viridans Group Streptococcus (VGS)" "Streptococcus downei"
"B_STRPT_VIRI" "B_STRPT_EQNS" "Viridans Group Streptococcus (VGS)" "Streptococcus equinus"
"B_STRPT_VIRI" "B_STRPT_FERS" "Viridans Group Streptococcus (VGS)" "Streptococcus ferus"
"B_STRPT_VIRI" "B_STRPT_GRDN" "Viridans Group Streptococcus (VGS)" "Streptococcus gordonii"
"B_STRPT_VIRI" "B_STRPT_INTR" "Viridans Group Streptococcus (VGS)" "Streptococcus intermedius"
"B_STRPT_VIRI" "B_STRPT_MACC" "Viridans Group Streptococcus (VGS)" "Streptococcus macacae"
"B_STRPT_VIRI" "B_STRPT_MITS" "Viridans Group Streptococcus (VGS)" "Streptococcus mitis"
"B_STRPT_VIRI" "B_STRPT_MITS_HHHT" "Viridans Group Streptococcus (VGS)" "Streptococcus mitis hohhotensis"
"B_STRPT_VIRI" "B_STRPT_MITS_MITS" "Viridans Group Streptococcus (VGS)" "Streptococcus mitis mitis"
"B_STRPT_VIRI" "B_STRPT_MTNS" "Viridans Group Streptococcus (VGS)" "Streptococcus mutans"
"B_STRPT_VIRI" "B_STRPT_ORLS" "Viridans Group Streptococcus (VGS)" "Streptococcus oralis"
"B_STRPT_VIRI" "B_STRPT_ORLS_DNTS" "Viridans Group Streptococcus (VGS)" "Streptococcus oralis dentisani"
"B_STRPT_VIRI" "B_STRPT_ORLS_ORLS" "Viridans Group Streptococcus (VGS)" "Streptococcus oralis oralis"
"B_STRPT_VIRI" "B_STRPT_ORLS_TGRN" "Viridans Group Streptococcus (VGS)" "Streptococcus oralis tigurinus"
"B_STRPT_VIRI" "B_STRPT_PRSN" "Viridans Group Streptococcus (VGS)" "Streptococcus parasanguinis"
"B_STRPT_VIRI" "B_STRPT_RATT" "Viridans Group Streptococcus (VGS)" "Streptococcus ratti"
"B_STRPT_VIRI" "B_STRPT_SLVR" "Viridans Group Streptococcus (VGS)" "Streptococcus salivarius"
"B_STRPT_VIRI" "B_STRPT_SNGN" "Viridans Group Streptococcus (VGS)" "Streptococcus sanguinis"
"B_STRPT_VIRI" "B_STRPT_SBRN" "Viridans Group Streptococcus (VGS)" "Streptococcus sobrinus"
"B_STRPT_VIRI" "B_STRPT_SUIS" "Viridans Group Streptococcus (VGS)" "Streptococcus suis"
"B_STRPT_VIRI" "B_STRPT_SUIS_HSHM" "Viridans Group Streptococcus (VGS)" "Streptococcus suis hashimotonensis"
"B_STRPT_VIRI" "B_STRPT_SUIS_SUIS" "Viridans Group Streptococcus (VGS)" "Streptococcus suis suis"
"B_STRPT_VIRI" "B_STRPT_UBRS" "Viridans Group Streptococcus (VGS)" "Streptococcus uberis"
"B_STRPT_VIRI" "B_STRPT_VSTB" "Viridans Group Streptococcus (VGS)" "Streptococcus vestibularis"
"B_YERSN_PSDT-C" "B_YERSN_PSTS" "Yersinia pseudotuberculosis complex" "Yersinia pestis"
"B_YERSN_PSDT-C" "B_YERSN_PSDT" "Yersinia pseudotuberculosis complex" "Yersinia pseudotuberculosis"
"B_YERSN_PSDT-C" "B_YERSN_SMLS" "Yersinia pseudotuberculosis complex" "Yersinia similis"
"B_YERSN_PSDT-C" "B_YERSN_WTRS" "Yersinia pseudotuberculosis complex" "Yersinia wautersii"
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