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AMR/data-raw/datasets/clinical_breakpoints.xlsx
T
dr. M.S. (Matthijs) Berends 361dfc28f7 Apply the EUCAST breakpoints of Vibrio to the species that EUCAST states only
The Vibrio sheet (v12.0 to v16.1) states: "Breakpoints are valid for V. alginolyticus, V. cholerae, V. fluvialis, V. parahaemolyticus and V. vulnificus." The rows of the genus are therefore replaced by rows of these species, with the statement in the note. Other species and isolates identified at genus level give NA, or use PK/PD breakpoints in EUCAST 2022-2023. CLSI is unchanged.

Any other wording of "breakpoints are valid for" now stops the script, so that a new statement cannot be missed.
2026-11-03 17:14:15 +01:00

3.4 MiB