AMR/docs/extra.js

/*
# ==================================================================== #
# TITLE                                                                #
# Antimicrobial Resistance (AMR) Data Analysis for R                   #
#                                                                      #
# SOURCE                                                               #
# https://github.com/msberends/AMR                                     #
#                                                                      #
# LICENCE                                                              #
# (c) 2018-2022 Berends MS, Luz CF et al.                              #
# Developed at the University of Groningen, the Netherlands, in        #
# collaboration with non-profit organisations Certe Medical            #
# Diagnostics & Advice, and University Medical Center Groningen.       # 
#                                                                      #
# This R package is free software; you can freely use and distribute   #
# it for both personal and commercial purposes under the terms of the  #
# GNU General Public License version 2.0 (GNU GPL-2), as published by  #
# the Free Software Foundation.                                        #
# We created this package for both routine data analysis and academic  #
# research and it was publicly released in the hope that it will be    #
# useful, but it comes WITHOUT ANY WARRANTY OR LIABILITY.              #
#                                                                      #
# Visit our website for the full manual and a complete tutorial about  #
# how to conduct AMR data analysis: https://msberends.github.io/AMR/   #
# ==================================================================== #
*/

// Add updated Font Awesome 5.8.2 library
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  // Edit title of manual
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  // replace 'Value' in manual with 'Returned value'
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  // PR for 'R for Data Science' on How To pages
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    $('#pkgdown-sidebar').prepend(
    '<div id="r4ds">' +
    '  <div class="txt">' +
    '    <p>' +
    '      Learn R reading this great book: <i>R for Data Science</i>.' +
    '      <br><br>' +
    '      <a target="_blank" href="https://r4ds.had.co.nz/">' +
    '        Click to read it online - it was published for free.' +
    '      </a>' +
    '    </p>' +
    '  </div>' +
    '  <div class="img">' +
    '    <a target="_blank" href="https://r4ds.had.co.nz/">' +
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    '    </a>' +
    '  </div>' +
    '</div>');
  }

  // edit footer
  $('footer').html(
    '<div>' +
      '<p><code>AMR</code> (for R). Developed at the <a target="_blank" href="https://www.rug.nl">University of Groningen</a> in collaboration with non-profit organisations<br><a target="_blank" href="https://www.certe.nl">Certe Medical Diagnostics and Advice Foundation</a> and <a target="_blank" href="https://www.umcg.nl">University Medical Center Groningen</a>.</p>' +
            '<a target="_blank" href="https://www.rug.nl"><img src="https://github.com/msberends/AMR/raw/main/docs/logo_rug.png" class="footer_logo"></a>' + 
    '</div>');

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      x = x.replace("Christian", "Dr Christian");
      x = x.replace("Alex", "Prof. Alex");
      x = x.replace("Bhanu", "Prof. Bhanu");
      x = x.replace("Casper", "Prof. Casper");
      x = x.replace("Corinna", "Dr Corinna");
      // others
      x = x.replace("Bart", "Dr Bart");
      x = x.replace("Sofia", "Dr Sofia");
      x = x.replace("Dennis", "Dr Dennis");
      x = x.replace("Judith", "Dr Judith");
      x = x.replace("Gwen", "Dr Gwen");
      x = x.replace("Anthony", "Dr Anthony");
      x = x.replace("Rogier", "Dr Rogier");
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    return(x);
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  $(".template-citation-authors").html(doct_tit($(".template-citation-authors").html()));
  $('.template-citation-authors h1').eq(0).html("All contributors of the <code>AMR</code> package");
  $('.template-citation-authors h1').eq(1).html("How to cite the <code>AMR</code> package");
  $(".developers").html(doct_tit($(".developers").html()));
  $(".developers a[href='authors.html']").text("All contributors...");
});

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