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Code Releases Activity
AMR/R
History
dr. M.S. (Matthijs) Berends bc434db835 bring back antibiogram(), without deps
2023-02-10 16:18:00 +01:00
..
aa_amr-package.R
sort sir history
2023-01-23 15:01:21 +01:00
aa_globals.R
revert back to pre-antibiogram
2023-02-09 13:07:39 +01:00
aa_helper_functions.R
bring back antibiogram(), without deps
2023-02-10 16:18:00 +01:00
aa_helper_pm_functions.R
revert back to pre-antibiogram
2023-02-09 13:07:39 +01:00
aa_options.R
add all options to documentation
2023-01-23 20:07:57 +01:00
ab_from_text.R
documentation, file permissions
2023-01-19 12:54:53 +01:00
ab_property.R
bring back antibiogram(), without deps
2023-02-10 16:18:00 +01:00
ab_selectors.R
revert back to pre-antibiogram
2023-02-09 13:07:39 +01:00
ab.R
sort sir history
2023-01-23 15:01:21 +01:00
age.R
sort sir history
2023-01-23 15:01:21 +01:00
antibiogram.R
bring back antibiogram(), without deps
2023-02-10 16:18:00 +01:00
atc_online.R
revert back to pre-antibiogram
2023-02-09 13:07:39 +01:00
av_from_text.R
sort sir history
2023-01-23 15:01:21 +01:00
av_property.R
bring back antibiogram(), without deps
2023-02-10 16:18:00 +01:00
av.R
sort sir history
2023-01-23 15:01:21 +01:00
availability.R
Replace RSI with SIR
2023-01-21 23:47:20 +01:00
bug_drug_combinations.R
bring back antibiogram(), without deps
2023-02-10 16:18:00 +01:00
count.R
Replace RSI with SIR
2023-01-21 23:47:20 +01:00
custom_antimicrobials.R
add all options to documentation
2023-01-23 20:07:57 +01:00
custom_eucast_rules.R
sort sir history
2023-01-23 15:01:21 +01:00
custom_microorganisms.R
add all options to documentation
2023-01-23 20:07:57 +01:00
data.R
bring back antibiogram(), without deps
2023-02-10 16:18:00 +01:00
disk.R
revert back to pre-antibiogram
2023-02-09 13:07:39 +01:00
eucast_rules.R
revert back to pre-antibiogram
2023-02-09 13:07:39 +01:00
first_isolate.R
bring back antibiogram(), without deps
2023-02-10 16:18:00 +01:00
g.test.R
prelim fix for g.test
2023-01-30 12:26:48 +01:00
get_episode.R
bring back antibiogram(), without deps
2023-02-10 16:18:00 +01:00
ggplot_pca.R
sort sir history
2023-01-23 15:01:21 +01:00
ggplot_sir.R
bring back antibiogram(), without deps
2023-02-10 16:18:00 +01:00
guess_ab_col.R
sort sir history
2023-01-23 15:01:21 +01:00
italicise_taxonomy.R
sort sir history
2023-01-23 15:01:21 +01:00
join_microorganisms.R
revert back to pre-antibiogram
2023-02-09 13:07:39 +01:00
key_antimicrobials.R
Replace RSI with SIR
2023-01-21 23:47:20 +01:00
kurtosis.R
support new mo codes
2022-12-27 15:16:15 +01:00
like.R
support new mo codes
2022-12-27 15:16:15 +01:00
mdro.R
sort sir history
2023-01-23 15:01:21 +01:00
mean_amr_distance.R
revert back to pre-antibiogram
2023-02-09 13:07:39 +01:00
mic.R
revert back to pre-antibiogram
2023-02-09 13:07:39 +01:00
mo_matching_score.R
sort sir history
2023-01-23 15:01:21 +01:00
mo_property.R
bring back antibiogram(), without deps
2023-02-10 16:18:00 +01:00
mo_source.R
add all options to documentation
2023-01-23 20:07:57 +01:00
mo.R
bring back antibiogram(), without deps
2023-02-10 16:18:00 +01:00
pca.R
revert back to pre-antibiogram
2023-02-09 13:07:39 +01:00
plot.R
revert back to pre-antibiogram
2023-02-09 13:07:39 +01:00
proportion.R
bring back antibiogram(), without deps
2023-02-10 16:18:00 +01:00
random.R
revert back to pre-antibiogram
2023-02-09 13:07:39 +01:00
resistance_predict.R
bring back antibiogram(), without deps
2023-02-10 16:18:00 +01:00
sir_calc.R
bring back antibiogram(), without deps
2023-02-10 16:18:00 +01:00
sir_df.R
Replace RSI with SIR
2023-01-21 23:47:20 +01:00
sir.R
bring back antibiogram(), without deps
2023-02-10 16:18:00 +01:00
skewness.R
support new mo codes
2022-12-27 15:16:15 +01:00
sysdata.rda
use dplyr where available, new antibiogram() for WISCA, fixed Salmonella Typhi/Paratyphi
2023-02-06 11:57:22 +01:00
translate.R
bring back antibiogram(), without deps
2023-02-10 16:18:00 +01:00
vctrs.R
Replace RSI with SIR
2023-01-21 23:47:20 +01:00
whocc.R
support new mo codes
2022-12-27 15:16:15 +01:00
zz_deprecated.R
documentation, unit tests
2023-01-24 10:20:27 +01:00
zzz.R
bring back antibiogram(), without deps
2023-02-10 16:18:00 +01:00