mirror of https://github.com/msberends/AMR.git
34 lines
1.1 KiB
R
34 lines
1.1 KiB
R
% Generated by roxygen2: do not edit by hand
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% Please edit documentation in R/availability.R
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\name{availability}
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\alias{availability}
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\title{Check Availability of Columns}
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\usage{
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availability(tbl, width = NULL)
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}
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\arguments{
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\item{tbl}{a \link{data.frame} or \link{list}}
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\item{width}{number of characters to present the visual availability, defaults to filling the width of the console}
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}
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\value{
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\link{data.frame} with column names of \code{tbl} as row names
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}
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\description{
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Easy check for data availability of all columns in a data set. This makes it easy to get an idea of which antimicrobial combinations can be used for calculation with e.g. \code{\link[=susceptibility]{susceptibility()}} and \code{\link[=resistance]{resistance()}}.
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}
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\details{
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The function returns a \link{data.frame} with columns \code{"resistant"} and \code{"visual_resistance"}. The values in that columns are calculated with \code{\link[=resistance]{resistance()}}.
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}
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\examples{
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availability(example_isolates)
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\donttest{
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if (require("dplyr")) {
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example_isolates \%>\%
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filter(mo == as.mo("Escherichia coli")) \%>\%
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select_if(is.sir) \%>\%
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availability()
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}
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}
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}
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