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AMR/tests/testthat/test-deprecated.R

27 lines
957 B
R

context("deprecated.R")
test_that("deprecated functions work", {
expect_identical(is.mo(as.mo("esco")), suppressWarnings(is.bactid(as.bactid("esco"))))
expect_warning(identical(is.mo(as.mo("esco")), is.bactid(as.bactid("esco"))))
expect_identical(as.mo("esco"), suppressWarnings(guess_bactid("esco")))
expect_error(suppressWarnings(ratio("A")))
expect_error(suppressWarnings(ratio(1, ratio = "abc")))
expect_error(suppressWarnings(ratio(c(1, 2), ratio = c(1, 2, 3))))
expect_warning(ratio(c(772, 1611, 737), ratio = "1:2:1"))
expect_identical(suppressWarnings(ratio(c(772, 1611, 737), ratio = "1:2:1")), c(780, 1560, 780))
expect_identical(suppressWarnings(ratio(c(1752, 1895), ratio = c(1, 1))), c(1823.5, 1823.5))
old_mo <- "ESCCOL"
class(old_mo) <- "bactid"
df_oldmo <- data.frame(test = old_mo)
# print
expect_output(print(old_mo))
# test pull
library(dplyr)
expect_identical(df_oldmo %>% pull(test), old_mo)
})