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AMR/R
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dr. M.S. (Matthijs) Berends dfae4c7e7d fast-forward from pull 
Merge branch 'main' of https://github.com/msberends/AMR into main

# Conflicts:
#	DESCRIPTION
#	R/add_custom_antimicrobials.R
2022-10-11 10:53:51 +02:00
..
aa_globals.R
New mo algorithm, prepare for 2.0
2022-10-05 09:12:22 +02:00
aa_helper_functions.R
fix documentation
2022-10-06 11:33:30 +02:00
aa_helper_pm_functions.R
New mo algorithm, prepare for 2.0
2022-10-05 09:12:22 +02:00
ab_from_text.R
fix for NA in as.ab()
2022-10-10 15:44:59 +02:00
ab_property.R
documentation fix
2022-10-10 21:03:39 +02:00
ab_selectors.R
support ab selectors for manual AB codes
2022-10-11 10:49:55 +02:00
ab.R
add add_custom_antimicrobials()
2022-10-10 20:20:39 +02:00
add_custom_antimicrobials.R
fast-forward from pull
2022-10-11 10:53:51 +02:00
age.R
New mo algorithm, prepare for 2.0
2022-10-05 09:12:22 +02:00
amr.R
New mo algorithm, prepare for 2.0
2022-10-05 09:12:22 +02:00
atc_online.R
New mo algorithm, prepare for 2.0
2022-10-05 09:12:22 +02:00
availability.R
New mo algorithm, prepare for 2.0
2022-10-05 09:12:22 +02:00
bug_drug_combinations.R
New mo algorithm, prepare for 2.0
2022-10-05 09:12:22 +02:00
count.R
New mo algorithm, prepare for 2.0
2022-10-05 09:12:22 +02:00
custom_eucast_rules.R
New mo algorithm, prepare for 2.0
2022-10-05 09:12:22 +02:00
data.R
fix for NA in as.ab()
2022-10-10 15:44:59 +02:00
deprecated.R
New mo algorithm, prepare for 2.0
2022-10-05 09:12:22 +02:00
disk.R
New mo algorithm, prepare for 2.0
2022-10-05 09:12:22 +02:00
episode.R
New mo algorithm, prepare for 2.0
2022-10-05 09:12:22 +02:00
eucast_rules.R
New mo algorithm, prepare for 2.0
2022-10-05 09:12:22 +02:00
first_isolate.R
fix for NA in as.ab()
2022-10-10 15:44:59 +02:00
g.test.R
fix for NA in as.ab()
2022-10-10 15:44:59 +02:00
ggplot_pca.R
New mo algorithm, prepare for 2.0
2022-10-05 09:12:22 +02:00
ggplot_rsi.R
fix for NA in as.ab()
2022-10-10 15:44:59 +02:00
guess_ab_col.R
New mo algorithm, prepare for 2.0
2022-10-05 09:12:22 +02:00
italicise_taxonomy.R
New mo algorithm, prepare for 2.0
2022-10-05 09:12:22 +02:00
join_microorganisms.R
New mo algorithm, prepare for 2.0
2022-10-05 09:12:22 +02:00
key_antimicrobials.R
New mo algorithm, prepare for 2.0
2022-10-05 09:12:22 +02:00
kurtosis.R
New mo algorithm, prepare for 2.0
2022-10-05 09:12:22 +02:00
like.R
New mo algorithm, prepare for 2.0
2022-10-05 09:12:22 +02:00
mdro.R
New mo algorithm, prepare for 2.0
2022-10-05 09:12:22 +02:00
mean_amr_distance.R
New mo algorithm, prepare for 2.0
2022-10-05 09:12:22 +02:00
mic.R
New mo algorithm, prepare for 2.0
2022-10-05 09:12:22 +02:00
mo_matching_score.R
New mo algorithm, prepare for 2.0
2022-10-05 09:12:22 +02:00
mo_property.R
add mo_current()
2022-10-10 10:12:08 +02:00
mo_source.R
New mo algorithm, prepare for 2.0
2022-10-05 09:12:22 +02:00
mo.R
add mo_current()
2022-10-10 10:12:08 +02:00
pca.R
New mo algorithm, prepare for 2.0
2022-10-05 09:12:22 +02:00
plot.R
New mo algorithm, prepare for 2.0
2022-10-05 09:12:22 +02:00
proportion.R
New mo algorithm, prepare for 2.0
2022-10-05 09:12:22 +02:00
random.R
New mo algorithm, prepare for 2.0
2022-10-05 09:12:22 +02:00
resistance_predict.R
New mo algorithm, prepare for 2.0
2022-10-05 09:12:22 +02:00
rsi_calc.R
New mo algorithm, prepare for 2.0
2022-10-05 09:12:22 +02:00
rsi_df.R
New mo algorithm, prepare for 2.0
2022-10-05 09:12:22 +02:00
rsi.R
fix for NA in as.ab()
2022-10-10 15:44:59 +02:00
skewness.R
New mo algorithm, prepare for 2.0
2022-10-05 09:12:22 +02:00
sysdata.rda
fix for mo type translation
2022-10-06 12:11:51 +02:00
translate.R
fix for NA in as.ab()
2022-10-10 15:44:59 +02:00
vctrs.R
New mo algorithm, prepare for 2.0
2022-10-05 09:12:22 +02:00
whocc.R
New mo algorithm, prepare for 2.0
2022-10-05 09:12:22 +02:00
zzz.R
support ab selectors for manual AB codes
2022-10-11 10:49:55 +02:00