mirror of https://github.com/msberends/AMR.git
27 lines
1.1 KiB
R
27 lines
1.1 KiB
R
context("mo_property.R")
|
|
|
|
test_that("mo_property works", {
|
|
expect_equal(mo_family("E. coli"), "Enterobacteriaceae")
|
|
expect_equal(mo_genus("E. coli"), "Escherichia")
|
|
expect_equal(mo_species("E. coli"), "coli")
|
|
expect_equal(mo_subspecies("E. coli"), NA_character_)
|
|
expect_equal(mo_fullname("E. coli"), "Escherichia coli")
|
|
expect_equal(mo_type("E. coli"), "Bacteria")
|
|
expect_equal(mo_gramstain("E. coli"), "Negative rods")
|
|
expect_equal(mo_aerobic("E. coli"), TRUE)
|
|
|
|
expect_equal(mo_shortname("MRSA"), "S. aureus")
|
|
expect_equal(mo_shortname("MRSA", Becker = TRUE), "S. aureus")
|
|
expect_equal(mo_shortname("MRSA", Becker = "all"), "CoPS")
|
|
expect_equal(mo_shortname("S. aga"), "S. agalactiae")
|
|
expect_equal(mo_shortname("S. aga", Lancefield = TRUE), "GBS")
|
|
|
|
expect_equal(mo_type("E. coli", language = "de"), "Bakterien")
|
|
expect_equal(mo_gramstain("E. coli", language = "de"), "Negative Staebchen")
|
|
|
|
expect_equal(mo_type("E. coli", language = "nl"), "Bacterie")
|
|
expect_equal(mo_gramstain("E. coli", language = "nl"), "Negatieve staven")
|
|
|
|
expect_error(mo_type("E. coli", language = "INVALID"))
|
|
})
|