mirror of
https://github.com/msberends/AMR.git
synced 2025-04-22 18:23:52 +02:00
67 lines
3.0 KiB
YAML
67 lines
3.0 KiB
YAML
# ==================================================================== #
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# TITLE: #
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# AMR: An R Package for Working with Antimicrobial Resistance Data #
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# #
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# SOURCE CODE: #
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# https://github.com/msberends/AMR #
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# #
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# PLEASE CITE THIS SOFTWARE AS: #
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# Berends MS, Luz CF, Friedrich AW, et al. (2022). #
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# AMR: An R Package for Working with Antimicrobial Resistance Data. #
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# Journal of Statistical Software, 104(3), 1-31. #
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# https://doi.org/10.18637/jss.v104.i03 #
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# #
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# Developed at the University of Groningen and the University Medical #
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# Center Groningen in The Netherlands, in collaboration with many #
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# colleagues from around the world, see our website. #
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# #
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# This R package is free software; you can freely use and distribute #
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# it for both personal and commercial purposes under the terms of the #
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# GNU General Public License version 2.0 (GNU GPL-2), as published by #
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# the Free Software Foundation. #
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# We created this package for both routine data analysis and academic #
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# research and it was publicly released in the hope that it will be #
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# useful, but it comes WITHOUT ANY WARRANTY OR LIABILITY. #
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# #
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# Visit our website for the full manual and a complete tutorial about #
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# how to conduct AMR data analysis: https://amr-for-r.org #
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# ==================================================================== #
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on:
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push:
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# only on main
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branches: "main"
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name: Publish GPT Training Data to GitHub
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jobs:
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update-pypi:
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runs-on: ubuntu-latest
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env:
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PYPI_PAT: ${{ secrets.PYPI_PAT }}
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steps:
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- name: Checkout code
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uses: actions/checkout@v4
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- name: Build the training data
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run: |
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bash data-raw/_generate_GPT_knowledge_input.sh
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- name: Git push to amr-for-r-assistant repo
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run: |
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mkdir ~/other
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# to also mv hidden files:
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shopt -s dotglob
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mv ./* ~/other/
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git clone https://github.com/msberends/amr-for-r-assistant
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cd amr-for-r-assistant
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mv ~/other/data-raw/latest_training_data.txt ./
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git config user.name "github-actions[bot]"
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git config user.email "github-actions[bot]@users.noreply.github.com"
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git add latest_training_data.txt
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git commit -m "GPT training data update"
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git push https://$PYPI_PAT@github.com/msberends/amr-for-r-assistant.git main --force
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