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f5ea4ea4ba
Bug: lapply() over a factor yields length-1 factor elements (integer codes), while for() over a factor yields character strings. The job list stored j\$group as a factor integer, but the reassembly loop compared it with identical(j\$group, g) where g was character -- always FALSE, so no simulation chunks were ever assembled and coverage stayed NA throughout. Fix: convert unique_groups to character before building jobs so both the job list and the reassembly loop use the same type. Tests: replaced na.rm = TRUE guards with explicit anyNA() checks so the test suite would have caught the all-NA result immediately. Also adds a sequential-mode performance hint (analogous to sir.R lines 1116-1127) when simulations >= 500 and >= 3 regimens. https://claude.ai/code/session_01FC43syPbzhGmKgrrVNHjnF