P281424
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AMR
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AMR/R
History
dr. M.S. (Matthijs) Berends f7dd890b79 fixes 2023-02-06 12:38:52 +01:00
..
aa_amr-package.R sort sir history 2023-01-23 15:01:21 +01:00
aa_globals.R fixes 2023-02-06 12:38:52 +01:00
aa_helper_pm_functions.R use dplyr where available, new `antibiogram()` for WISCA, fixed Salmonella Typhi/Paratyphi 2023-02-06 11:57:22 +01:00
aa_options.R add all options to documentation 2023-01-23 20:07:57 +01:00
aaa_helper_functions.R use dplyr where available, new `antibiogram()` for WISCA, fixed Salmonella Typhi/Paratyphi 2023-02-06 11:57:22 +01:00
ab.R sort sir history 2023-01-23 15:01:21 +01:00
ab_from_text.R documentation, file permissions 2023-01-19 12:54:53 +01:00
ab_property.R fixes 2023-02-06 12:38:52 +01:00
ab_selectors.R use dplyr where available, new `antibiogram()` for WISCA, fixed Salmonella Typhi/Paratyphi 2023-02-06 11:57:22 +01:00
age.R sort sir history 2023-01-23 15:01:21 +01:00
antibiogram.R fixes 2023-02-06 12:38:52 +01:00
atc_online.R use dplyr where available, new `antibiogram()` for WISCA, fixed Salmonella Typhi/Paratyphi 2023-02-06 11:57:22 +01:00
av.R sort sir history 2023-01-23 15:01:21 +01:00
av_from_text.R sort sir history 2023-01-23 15:01:21 +01:00
av_property.R use dplyr where available, new `antibiogram()` for WISCA, fixed Salmonella Typhi/Paratyphi 2023-02-06 11:57:22 +01:00
availability.R Replace RSI with SIR 2023-01-21 23:47:20 +01:00
bug_drug_combinations.R use dplyr where available, new `antibiogram()` for WISCA, fixed Salmonella Typhi/Paratyphi 2023-02-06 11:57:22 +01:00
count.R Replace RSI with SIR 2023-01-21 23:47:20 +01:00
custom_antimicrobials.R add all options to documentation 2023-01-23 20:07:57 +01:00
custom_eucast_rules.R sort sir history 2023-01-23 15:01:21 +01:00
custom_microorganisms.R add all options to documentation 2023-01-23 20:07:57 +01:00
data.R use dplyr where available, new `antibiogram()` for WISCA, fixed Salmonella Typhi/Paratyphi 2023-02-06 11:57:22 +01:00
disk.R use dplyr where available, new `antibiogram()` for WISCA, fixed Salmonella Typhi/Paratyphi 2023-02-06 11:57:22 +01:00
eucast_rules.R use dplyr where available, new `antibiogram()` for WISCA, fixed Salmonella Typhi/Paratyphi 2023-02-06 11:57:22 +01:00
first_isolate.R use dplyr where available, new `antibiogram()` for WISCA, fixed Salmonella Typhi/Paratyphi 2023-02-06 11:57:22 +01:00
g.test.R prelim fix for g.test 2023-01-30 12:26:48 +01:00
get_episode.R use dplyr where available, new `antibiogram()` for WISCA, fixed Salmonella Typhi/Paratyphi 2023-02-06 11:57:22 +01:00
ggplot_pca.R sort sir history 2023-01-23 15:01:21 +01:00
ggplot_sir.R use dplyr where available, new `antibiogram()` for WISCA, fixed Salmonella Typhi/Paratyphi 2023-02-06 11:57:22 +01:00
guess_ab_col.R sort sir history 2023-01-23 15:01:21 +01:00
italicise_taxonomy.R sort sir history 2023-01-23 15:01:21 +01:00
join_microorganisms.R use dplyr where available, new `antibiogram()` for WISCA, fixed Salmonella Typhi/Paratyphi 2023-02-06 11:57:22 +01:00
key_antimicrobials.R Replace RSI with SIR 2023-01-21 23:47:20 +01:00
kurtosis.R support new mo codes 2022-12-27 15:16:15 +01:00
like.R support new mo codes 2022-12-27 15:16:15 +01:00
mdro.R sort sir history 2023-01-23 15:01:21 +01:00
mean_amr_distance.R use dplyr where available, new `antibiogram()` for WISCA, fixed Salmonella Typhi/Paratyphi 2023-02-06 11:57:22 +01:00
mic.R use dplyr where available, new `antibiogram()` for WISCA, fixed Salmonella Typhi/Paratyphi 2023-02-06 11:57:22 +01:00
mo.R use dplyr where available, new `antibiogram()` for WISCA, fixed Salmonella Typhi/Paratyphi 2023-02-06 11:57:22 +01:00
mo_matching_score.R sort sir history 2023-01-23 15:01:21 +01:00
mo_property.R use dplyr where available, new `antibiogram()` for WISCA, fixed Salmonella Typhi/Paratyphi 2023-02-06 11:57:22 +01:00
mo_source.R add all options to documentation 2023-01-23 20:07:57 +01:00
pca.R use dplyr where available, new `antibiogram()` for WISCA, fixed Salmonella Typhi/Paratyphi 2023-02-06 11:57:22 +01:00
plot.R use dplyr where available, new `antibiogram()` for WISCA, fixed Salmonella Typhi/Paratyphi 2023-02-06 11:57:22 +01:00
proportion.R use dplyr where available, new `antibiogram()` for WISCA, fixed Salmonella Typhi/Paratyphi 2023-02-06 11:57:22 +01:00
random.R use dplyr where available, new `antibiogram()` for WISCA, fixed Salmonella Typhi/Paratyphi 2023-02-06 11:57:22 +01:00
resistance_predict.R use dplyr where available, new `antibiogram()` for WISCA, fixed Salmonella Typhi/Paratyphi 2023-02-06 11:57:22 +01:00
sir.R use dplyr where available, new `antibiogram()` for WISCA, fixed Salmonella Typhi/Paratyphi 2023-02-06 11:57:22 +01:00
sir_calc.R use dplyr where available, new `antibiogram()` for WISCA, fixed Salmonella Typhi/Paratyphi 2023-02-06 11:57:22 +01:00
sir_df.R Replace RSI with SIR 2023-01-21 23:47:20 +01:00
skewness.R support new mo codes 2022-12-27 15:16:15 +01:00
sysdata.rda use dplyr where available, new `antibiogram()` for WISCA, fixed Salmonella Typhi/Paratyphi 2023-02-06 11:57:22 +01:00
translate.R use dplyr where available, new `antibiogram()` for WISCA, fixed Salmonella Typhi/Paratyphi 2023-02-06 11:57:22 +01:00
vctrs.R Replace RSI with SIR 2023-01-21 23:47:20 +01:00
whocc.R support new mo codes 2022-12-27 15:16:15 +01:00
zz_deprecated.R documentation, unit tests 2023-01-24 10:20:27 +01:00
zzz.R use dplyr where available, new `antibiogram()` for WISCA, fixed Salmonella Typhi/Paratyphi 2023-02-06 11:57:22 +01:00