AMR/R
dr. M.S. (Matthijs) Berends 7a4628b73f Added C. freundii complex and Y. pseudotuberculosis complex 2023-07-14 10:49:06 +02:00
..
aa_amr-package.R new species groups, updated clinical breakpoints 2023-07-08 17:30:05 +02:00
aa_globals.R reftbl in plots, speedup for as.sir() and mo_validate 2023-07-10 16:43:46 +02:00
aa_helper_functions.R console hyperlink fix 2023-07-14 09:50:13 +02:00
aa_helper_pm_functions.R new species groups, updated clinical breakpoints 2023-07-08 17:30:05 +02:00
aa_options.R new species groups, updated clinical breakpoints 2023-07-08 17:30:05 +02:00
ab.R mouse-hover fixes 2023-07-12 15:27:43 +01:00
ab_from_text.R new species groups, updated clinical breakpoints 2023-07-08 17:30:05 +02:00
ab_property.R new species groups, updated clinical breakpoints 2023-07-08 17:30:05 +02:00
ab_selectors.R new species groups, updated clinical breakpoints 2023-07-08 17:30:05 +02:00
age.R new species groups, updated clinical breakpoints 2023-07-08 17:30:05 +02:00
antibiogram.R new species groups, updated clinical breakpoints 2023-07-08 17:30:05 +02:00
atc_online.R new species groups, updated clinical breakpoints 2023-07-08 17:30:05 +02:00
av.R new species groups, updated clinical breakpoints 2023-07-08 17:30:05 +02:00
av_from_text.R new species groups, updated clinical breakpoints 2023-07-08 17:30:05 +02:00
av_property.R new species groups, updated clinical breakpoints 2023-07-08 17:30:05 +02:00
availability.R new species groups, updated clinical breakpoints 2023-07-08 17:30:05 +02:00
bug_drug_combinations.R new species groups, updated clinical breakpoints 2023-07-08 17:30:05 +02:00
count.R new species groups, updated clinical breakpoints 2023-07-08 17:30:05 +02:00
custom_antimicrobials.R new species groups, updated clinical breakpoints 2023-07-08 17:30:05 +02:00
custom_eucast_rules.R new species groups, updated clinical breakpoints 2023-07-08 17:30:05 +02:00
custom_microorganisms.R new species groups, updated clinical breakpoints 2023-07-08 17:30:05 +02:00
data.R indicate unique identifiers 2023-07-12 21:26:32 +02:00
disk.R cleanup 2023-07-11 14:29:40 +02:00
eucast_rules.R new species groups, updated clinical breakpoints 2023-07-08 17:30:05 +02:00
first_isolate.R new species groups, updated clinical breakpoints 2023-07-08 17:30:05 +02:00
g.test.R new species groups, updated clinical breakpoints 2023-07-08 17:30:05 +02:00
get_episode.R new species groups, updated clinical breakpoints 2023-07-08 17:30:05 +02:00
ggplot_pca.R new species groups, updated clinical breakpoints 2023-07-08 17:30:05 +02:00
ggplot_sir.R new species groups, updated clinical breakpoints 2023-07-08 17:30:05 +02:00
guess_ab_col.R new species groups, updated clinical breakpoints 2023-07-08 17:30:05 +02:00
italicise_taxonomy.R new species groups, updated clinical breakpoints 2023-07-08 17:30:05 +02:00
join_microorganisms.R new species groups, updated clinical breakpoints 2023-07-08 17:30:05 +02:00
key_antimicrobials.R new species groups, updated clinical breakpoints 2023-07-08 17:30:05 +02:00
kurtosis.R new species groups, updated clinical breakpoints 2023-07-08 17:30:05 +02:00
like.R new species groups, updated clinical breakpoints 2023-07-08 17:30:05 +02:00
mdro.R breakpoints fixes 2023-07-12 15:20:04 +01:00
mean_amr_distance.R new species groups, updated clinical breakpoints 2023-07-08 17:30:05 +02:00
mic.R new species groups, updated clinical breakpoints 2023-07-08 17:30:05 +02:00
mo.R mouse-hover fixes 2023-07-12 15:27:43 +01:00
mo_matching_score.R new species groups, updated clinical breakpoints 2023-07-08 17:30:05 +02:00
mo_property.R reftbl in plots, speedup for as.sir() and mo_validate 2023-07-10 16:43:46 +02:00
mo_source.R new species groups, updated clinical breakpoints 2023-07-08 17:30:05 +02:00
pca.R new species groups, updated clinical breakpoints 2023-07-08 17:30:05 +02:00
plot.R fixes 2023-07-10 17:02:28 +02:00
proportion.R new species groups, updated clinical breakpoints 2023-07-08 17:30:05 +02:00
random.R random() fix 2023-07-08 21:00:49 +02:00
resistance_predict.R new species groups, updated clinical breakpoints 2023-07-08 17:30:05 +02:00
sir.R add strep groups to ABCG 2023-07-12 11:41:25 +01:00
sir_calc.R new species groups, updated clinical breakpoints 2023-07-08 17:30:05 +02:00
sir_df.R new species groups, updated clinical breakpoints 2023-07-08 17:30:05 +02:00
skewness.R new species groups, updated clinical breakpoints 2023-07-08 17:30:05 +02:00
sysdata.rda console hyperlink fix 2023-07-14 09:50:13 +02:00
translate.R new species groups, updated clinical breakpoints 2023-07-08 17:30:05 +02:00
vctrs.R new species groups, updated clinical breakpoints 2023-07-08 17:30:05 +02:00
whocc.R new species groups, updated clinical breakpoints 2023-07-08 17:30:05 +02:00
zz_deprecated.R new species groups, updated clinical breakpoints 2023-07-08 17:30:05 +02:00
zzz.R Added C. freundii complex and Y. pseudotuberculosis complex 2023-07-14 10:49:06 +02:00