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Code Releases Activity
AMR/man
History
dr. M.S. (Matthijs) Berends 1710e220dd
AMR v3.0\!
2025-06-02 12:11:00 +02:00
..
ab_from_text.Rd
(v2.1.1.9233) chore: make all argument texts full sentences
2025-03-31 14:53:24 +02:00
ab_property.Rd
(v2.1.1.9260) fix antibiogram
2025-04-29 16:15:18 +02:00
add_custom_antimicrobials.Rd
(v2.1.1.9233) chore: make all argument texts full sentences
2025-03-31 14:53:24 +02:00
add_custom_microorganisms.Rd
(v2.1.1.9233) chore: make all argument texts full sentences
2025-03-31 14:53:24 +02:00
age_groups.Rd
(v2.1.1.9233) chore: make all argument texts full sentences
2025-03-31 14:53:24 +02:00
age.Rd
(v2.1.1.9233) chore: make all argument texts full sentences
2025-03-31 14:53:24 +02:00
AMR-deprecated.Rd
(v2.1.1.9287) fix antibiotics
2025-06-01 12:17:47 +02:00
AMR-options.Rd
(v2.1.1.9270) Add support for Korean, fix ATCs
2025-05-04 14:24:43 +02:00
AMR.Rd
(v2.1.1.9270) Add support for Korean, fix ATCs
2025-05-04 14:24:43 +02:00
antibiogram.Rd
AMR v3.0\!
2025-06-02 12:11:00 +02:00
antimicrobial_selectors.Rd
(v2.1.1.9276) mdro() fix
2025-05-15 10:39:48 +02:00
antimicrobials.Rd
(v2.1.1.9289) unit test fix
2025-06-01 16:00:12 +02:00
as.ab.Rd
(v2.1.1.9270) Add support for Korean, fix ATCs
2025-05-04 14:24:43 +02:00
as.av.Rd
(v2.1.1.9260) fix antibiogram
2025-04-29 16:15:18 +02:00
as.disk.Rd
(v2.1.1.9233) chore: make all argument texts full sentences
2025-03-31 14:53:24 +02:00
as.mic.Rd
(v2.1.1.9247) CLSI/EUCAST 2025!
2025-04-20 12:55:31 +02:00
as.mo.Rd
(v2.1.1.9260) fix antibiogram
2025-04-29 16:15:18 +02:00
as.sir.Rd
(v2.1.1.9274) Improve is_sir_eligible, rename verbose MDRO output
2025-05-12 12:35:11 +02:00
atc_online.Rd
(v2.1.1.9233) chore: make all argument texts full sentences
2025-03-31 14:53:24 +02:00
av_from_text.Rd
(v2.1.1.9233) chore: make all argument texts full sentences
2025-03-31 14:53:24 +02:00
av_property.Rd
(v2.1.1.9260) fix antibiogram
2025-04-29 16:15:18 +02:00
availability.Rd
(v2.1.1.9233) chore: make all argument texts full sentences
2025-03-31 14:53:24 +02:00
bug_drug_combinations.Rd
(v2.1.1.9233) chore: make all argument texts full sentences
2025-03-31 14:53:24 +02:00
clinical_breakpoints.Rd
(v2.1.1.9260) fix antibiogram
2025-04-29 16:15:18 +02:00
count.Rd
(v2.1.1.9234) fix CLSI
2025-04-07 17:36:01 +01:00
custom_eucast_rules.Rd
(v2.1.1.9279) fix documentation, add foreign S3 exports to functions
2025-05-16 16:55:29 +02:00
custom_mdro_guideline.Rd
(v2.1.1.9279) fix documentation, add foreign S3 exports to functions
2025-05-16 16:55:29 +02:00
dosage.Rd
(v2.1.1.9260) fix antibiogram
2025-04-29 16:15:18 +02:00
eucast_rules.Rd
(v2.1.1.9279) fix documentation, add foreign S3 exports to functions
2025-05-16 16:55:29 +02:00
example_isolates_unclean.Rd
(v2.1.1.9260) fix antibiogram
2025-04-29 16:15:18 +02:00
example_isolates.Rd
(v2.1.1.9260) fix antibiogram
2025-04-29 16:15:18 +02:00
export_ncbi_biosample.Rd
(v2.1.1.9233) chore: make all argument texts full sentences
2025-03-31 14:53:24 +02:00
first_isolate.Rd
(v2.1.1.9233) chore: make all argument texts full sentences
2025-03-31 14:53:24 +02:00
g.test.Rd
AMR v3.0\!
2025-06-02 12:11:00 +02:00
get_episode.Rd
(v2.1.1.9233) chore: make all argument texts full sentences
2025-03-31 14:53:24 +02:00
ggplot_pca.Rd
(v2.1.1.9233) chore: make all argument texts full sentences
2025-03-31 14:53:24 +02:00
ggplot_sir.Rd
(v2.1.1.9233) chore: make all argument texts full sentences
2025-03-31 14:53:24 +02:00
guess_ab_col.Rd
(v2.1.1.9276) mdro() fix
2025-05-15 10:39:48 +02:00
intrinsic_resistant.Rd
(v2.1.1.9260) fix antibiogram
2025-04-29 16:15:18 +02:00
italicise_taxonomy.Rd
(v2.1.1.9233) chore: make all argument texts full sentences
2025-03-31 14:53:24 +02:00
join.Rd
(v2.1.1.9233) chore: make all argument texts full sentences
2025-03-31 14:53:24 +02:00
key_antimicrobials.Rd
(v2.1.1.9276) mdro() fix
2025-05-15 10:39:48 +02:00
kurtosis.Rd
(v2.1.1.9233) chore: make all argument texts full sentences
2025-03-31 14:53:24 +02:00
like.Rd
(v2.1.1.9232) is.mic() iteration, documentation cleanup
2025-03-31 10:51:31 +02:00
mdro.Rd
(v2.1.1.9279) fix documentation, add foreign S3 exports to functions
2025-05-16 16:55:29 +02:00
mean_amr_distance.Rd
(v2.1.1.9233) chore: make all argument texts full sentences
2025-03-31 14:53:24 +02:00
microorganisms.codes.Rd
(v2.1.1.9272) mo codes sensititre
2025-05-04 18:50:25 +02:00
microorganisms.groups.Rd
(v2.1.1.9260) fix antibiogram
2025-04-29 16:15:18 +02:00
microorganisms.Rd
(v2.1.1.9260) fix antibiogram
2025-04-29 16:15:18 +02:00
mo_matching_score.Rd
(v2.1.1.9260) fix antibiogram
2025-04-29 16:15:18 +02:00
mo_property.Rd
(v2.1.1.9260) fix antibiogram
2025-04-29 16:15:18 +02:00
mo_source.Rd
(v2.1.1.9232) is.mic() iteration, documentation cleanup
2025-03-31 10:51:31 +02:00
pca.Rd
(v2.1.1.9233) chore: make all argument texts full sentences
2025-03-31 14:53:24 +02:00
plot.Rd
(v2.1.1.9270) Add support for Korean, fix ATCs
2025-05-04 14:24:43 +02:00
proportion.Rd
(v2.1.1.9234) fix CLSI
2025-04-07 17:36:01 +01:00
random.Rd
(v2.1.1.9247) CLSI/EUCAST 2025!
2025-04-20 12:55:31 +02:00
resistance_predict.Rd
(v2.1.1.9237) clean-up
2025-04-13 09:59:40 +02:00
skewness.Rd
(v2.1.1.9233) chore: make all argument texts full sentences
2025-03-31 14:53:24 +02:00
top_n_microorganisms.Rd
(v2.1.1.9253) parallel computing
2025-04-26 15:47:00 +02:00
translate.Rd
(v2.1.1.9270) Add support for Korean, fix ATCs
2025-05-04 14:24:43 +02:00
WHOCC.Rd
new Norwegian link
2024-03-03 23:24:57 +01:00
WHONET.Rd
(v2.1.1.9260) fix antibiogram
2025-04-29 16:15:18 +02:00