2021-09-10 21:48:00 +02:00
|
|
|
<!DOCTYPE html>
|
|
|
|
|
<html lang="" xml:lang="">
|
|
|
|
|
<head>
|
|
|
|
|
|
|
|
|
|
<meta charset="utf-8" />
|
|
|
|
|
<meta http-equiv="X-UA-Compatible" content="IE=edge" />
|
|
|
|
|
<title>Page not found | A New Instrument for Microbial Epidemiology</title>
|
|
|
|
|
<meta name="description" content="This is the PhD thesis of the author." />
|
|
|
|
|
<meta name="generator" content="bookdown 0.24 and GitBook 2.6.7" />
|
|
|
|
|
|
|
|
|
|
<meta property="og:title" content="Page not found | A New Instrument for Microbial Epidemiology" />
|
|
|
|
|
<meta property="og:type" content="book" />
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
<meta property="og:description" content="This is the PhD thesis of the author." />
|
|
|
|
|
<meta name="github-repo" content="msberends/a_new_instrument_for_microbial_epidemiology" />
|
|
|
|
|
|
|
|
|
|
<meta name="twitter:card" content="summary" />
|
|
|
|
|
<meta name="twitter:title" content="Page not found | A New Instrument for Microbial Epidemiology" />
|
|
|
|
|
|
|
|
|
|
<meta name="twitter:description" content="This is the PhD thesis of the author." />
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
<meta name="author" content="Matthijs S. Berends" />
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
<meta name="viewport" content="width=device-width, initial-scale=1" />
|
|
|
|
|
<meta name="apple-mobile-web-app-capable" content="yes" />
|
|
|
|
|
<meta name="apple-mobile-web-app-status-bar-style" content="black" />
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
<script src="libs/header-attrs-2.10/header-attrs.js"></script>
|
|
|
|
|
<script src="libs/jquery-3.6.0/jquery-3.6.0.min.js"></script>
|
|
|
|
|
<script src="https://cdn.jsdelivr.net/npm/fuse.js@6.4.6/dist/fuse.min.js"></script>
|
|
|
|
|
<link href="libs/gitbook-2.6.7/css/style.css" rel="stylesheet" />
|
|
|
|
|
<link href="libs/gitbook-2.6.7/css/plugin-table.css" rel="stylesheet" />
|
|
|
|
|
<link href="libs/gitbook-2.6.7/css/plugin-bookdown.css" rel="stylesheet" />
|
|
|
|
|
<link href="libs/gitbook-2.6.7/css/plugin-highlight.css" rel="stylesheet" />
|
|
|
|
|
<link href="libs/gitbook-2.6.7/css/plugin-search.css" rel="stylesheet" />
|
|
|
|
|
<link href="libs/gitbook-2.6.7/css/plugin-fontsettings.css" rel="stylesheet" />
|
|
|
|
|
<link href="libs/gitbook-2.6.7/css/plugin-clipboard.css" rel="stylesheet" />
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
<link href="libs/anchor-sections-1.0.1/anchor-sections.css" rel="stylesheet" />
|
|
|
|
|
<script src="libs/anchor-sections-1.0.1/anchor-sections.js"></script>
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
<style type="text/css">
|
|
|
|
|
pre > code.sourceCode { white-space: pre; position: relative; }
|
|
|
|
|
pre > code.sourceCode > span { display: inline-block; line-height: 1.25; }
|
|
|
|
|
pre > code.sourceCode > span:empty { height: 1.2em; }
|
|
|
|
|
.sourceCode { overflow: visible; }
|
|
|
|
|
code.sourceCode > span { color: inherit; text-decoration: inherit; }
|
|
|
|
|
pre.sourceCode { margin: 0; }
|
|
|
|
|
@media screen {
|
|
|
|
|
div.sourceCode { overflow: auto; }
|
|
|
|
|
}
|
|
|
|
|
@media print {
|
|
|
|
|
pre > code.sourceCode { white-space: pre-wrap; }
|
|
|
|
|
pre > code.sourceCode > span { text-indent: -5em; padding-left: 5em; }
|
|
|
|
|
}
|
|
|
|
|
pre.numberSource code
|
|
|
|
|
{ counter-reset: source-line 0; }
|
|
|
|
|
pre.numberSource code > span
|
|
|
|
|
{ position: relative; left: -4em; counter-increment: source-line; }
|
|
|
|
|
pre.numberSource code > span > a:first-child::before
|
|
|
|
|
{ content: counter(source-line);
|
|
|
|
|
position: relative; left: -1em; text-align: right; vertical-align: baseline;
|
|
|
|
|
border: none; display: inline-block;
|
|
|
|
|
-webkit-touch-callout: none; -webkit-user-select: none;
|
|
|
|
|
-khtml-user-select: none; -moz-user-select: none;
|
|
|
|
|
-ms-user-select: none; user-select: none;
|
|
|
|
|
padding: 0 4px; width: 4em;
|
|
|
|
|
color: #aaaaaa;
|
|
|
|
|
}
|
|
|
|
|
pre.numberSource { margin-left: 3em; border-left: 1px solid #aaaaaa; padding-left: 4px; }
|
|
|
|
|
div.sourceCode
|
|
|
|
|
{ }
|
|
|
|
|
@media screen {
|
|
|
|
|
pre > code.sourceCode > span > a:first-child::before { text-decoration: underline; }
|
|
|
|
|
}
|
|
|
|
|
code span.al { color: #ff0000; font-weight: bold; } /* Alert */
|
|
|
|
|
code span.an { color: #60a0b0; font-weight: bold; font-style: italic; } /* Annotation */
|
|
|
|
|
code span.at { color: #7d9029; } /* Attribute */
|
|
|
|
|
code span.bn { color: #40a070; } /* BaseN */
|
|
|
|
|
code span.bu { } /* BuiltIn */
|
|
|
|
|
code span.cf { color: #007020; font-weight: bold; } /* ControlFlow */
|
|
|
|
|
code span.ch { color: #4070a0; } /* Char */
|
|
|
|
|
code span.cn { color: #880000; } /* Constant */
|
|
|
|
|
code span.co { color: #60a0b0; font-style: italic; } /* Comment */
|
|
|
|
|
code span.cv { color: #60a0b0; font-weight: bold; font-style: italic; } /* CommentVar */
|
|
|
|
|
code span.do { color: #ba2121; font-style: italic; } /* Documentation */
|
|
|
|
|
code span.dt { color: #902000; } /* DataType */
|
|
|
|
|
code span.dv { color: #40a070; } /* DecVal */
|
|
|
|
|
code span.er { color: #ff0000; font-weight: bold; } /* Error */
|
|
|
|
|
code span.ex { } /* Extension */
|
|
|
|
|
code span.fl { color: #40a070; } /* Float */
|
|
|
|
|
code span.fu { color: #06287e; } /* Function */
|
|
|
|
|
code span.im { } /* Import */
|
|
|
|
|
code span.in { color: #60a0b0; font-weight: bold; font-style: italic; } /* Information */
|
|
|
|
|
code span.kw { color: #007020; font-weight: bold; } /* Keyword */
|
|
|
|
|
code span.op { color: #666666; } /* Operator */
|
|
|
|
|
code span.ot { color: #007020; } /* Other */
|
|
|
|
|
code span.pp { color: #bc7a00; } /* Preprocessor */
|
|
|
|
|
code span.sc { color: #4070a0; } /* SpecialChar */
|
|
|
|
|
code span.ss { color: #bb6688; } /* SpecialString */
|
|
|
|
|
code span.st { color: #4070a0; } /* String */
|
|
|
|
|
code span.va { color: #19177c; } /* Variable */
|
|
|
|
|
code span.vs { color: #4070a0; } /* VerbatimString */
|
|
|
|
|
code span.wa { color: #60a0b0; font-weight: bold; font-style: italic; } /* Warning */
|
|
|
|
|
</style>
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
<link rel="stylesheet" href="style.css" type="text/css" />
|
|
|
|
|
</head>
|
|
|
|
|
|
|
|
|
|
<body>
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
<div class="book without-animation with-summary font-size-2 font-family-1" data-basepath=".">
|
|
|
|
|
|
|
|
|
|
<div class="book-summary">
|
|
|
|
|
<nav role="navigation">
|
|
|
|
|
|
|
|
|
|
<ul class="summary">
|
|
|
|
|
<li><a href="./">A New Instrument for Microbial Epidemiology</a></li>
|
|
|
|
|
|
|
|
|
|
<li class="divider"></li>
|
2021-09-10 22:22:38 +02:00
|
|
|
<li class="chapter" data-level="" data-path="index.html"><a href="index.html"><i class="fa fa-check"></i>Preamble</a>
|
|
|
|
|
<ul>
|
|
|
|
|
<li class="chapter" data-level="" data-path="index.html"><a href="index.html#short-summary-250-words"><i class="fa fa-check"></i>Short summary (250 words)</a></li>
|
|
|
|
|
</ul></li>
|
|
|
|
|
<li class="chapter" data-level="" data-path="colophon.html"><a href="colophon.html"><i class="fa fa-check"></i>Colophon</a></li>
|
2021-09-10 22:38:40 +02:00
|
|
|
<li class="chapter" data-level="1" data-path="introduction.html"><a href="introduction.html"><i class="fa fa-check"></i><b>1</b> Introduction</a>
|
|
|
|
|
<ul>
|
|
|
|
|
<li class="chapter" data-level="1.1" data-path="introduction.html"><a href="introduction.html#microbial-epidemiology"><i class="fa fa-check"></i><b>1.1</b> Microbial Epidemiology</a></li>
|
|
|
|
|
<li class="chapter" data-level="" data-path="introduction.html"><a href="introduction.html#references"><i class="fa fa-check"></i>References</a></li>
|
|
|
|
|
</ul></li>
|
2021-09-10 21:48:00 +02:00
|
|
|
<li class="divider"></li>
|
|
|
|
|
<li><a href="https://github.com/rstudio/bookdown" target="blank">Published with bookdown</a></li>
|
|
|
|
|
|
|
|
|
|
</ul>
|
|
|
|
|
|
|
|
|
|
</nav>
|
|
|
|
|
</div>
|
|
|
|
|
|
|
|
|
|
<div class="book-body">
|
|
|
|
|
<div class="body-inner">
|
|
|
|
|
<div class="book-header" role="navigation">
|
|
|
|
|
<h1>
|
|
|
|
|
<i class="fa fa-circle-o-notch fa-spin"></i><a href="./">A New Instrument for Microbial Epidemiology</a>
|
|
|
|
|
</h1>
|
|
|
|
|
</div>
|
|
|
|
|
|
|
|
|
|
<div class="page-wrapper" tabindex="-1" role="main">
|
|
|
|
|
<div class="page-inner">
|
|
|
|
|
|
|
|
|
|
<section class="normal" id="section-">
|
|
|
|
|
<div id="page-not-found" class="section level1">
|
|
|
|
|
<h1>Page not found</h1>
|
|
|
|
|
<p>The page you requested cannot be found (perhaps it was moved or renamed).</p>
|
|
|
|
|
<p>You may want to try searching to find the page's new location, or use
|
|
|
|
|
the table of contents to find the page you are looking for.</p>
|
|
|
|
|
</div>
|
|
|
|
|
</section>
|
|
|
|
|
|
|
|
|
|
</div>
|
|
|
|
|
</div>
|
|
|
|
|
</div>
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
</div>
|
|
|
|
|
</div>
|
|
|
|
|
<script src="libs/gitbook-2.6.7/js/app.min.js"></script>
|
|
|
|
|
<script src="libs/gitbook-2.6.7/js/clipboard.min.js"></script>
|
|
|
|
|
<script src="libs/gitbook-2.6.7/js/plugin-search.js"></script>
|
|
|
|
|
<script src="libs/gitbook-2.6.7/js/plugin-sharing.js"></script>
|
|
|
|
|
<script src="libs/gitbook-2.6.7/js/plugin-fontsettings.js"></script>
|
|
|
|
|
<script src="libs/gitbook-2.6.7/js/plugin-bookdown.js"></script>
|
|
|
|
|
<script src="libs/gitbook-2.6.7/js/jquery.highlight.js"></script>
|
|
|
|
|
<script src="libs/gitbook-2.6.7/js/plugin-clipboard.js"></script>
|
|
|
|
|
<script>
|
|
|
|
|
gitbook.require(["gitbook"], function(gitbook) {
|
|
|
|
|
gitbook.start({
|
|
|
|
|
"sharing": {
|
|
|
|
|
"github": false,
|
|
|
|
|
"facebook": true,
|
|
|
|
|
"twitter": true,
|
|
|
|
|
"linkedin": false,
|
|
|
|
|
"weibo": false,
|
|
|
|
|
"instapaper": false,
|
|
|
|
|
"vk": false,
|
|
|
|
|
"whatsapp": false,
|
|
|
|
|
"all": ["facebook", "twitter", "linkedin", "weibo", "instapaper"]
|
|
|
|
|
},
|
|
|
|
|
"fontsettings": {
|
|
|
|
|
"theme": "white",
|
|
|
|
|
"family": "sans",
|
|
|
|
|
"size": 2
|
|
|
|
|
},
|
|
|
|
|
"edit": {
|
|
|
|
|
"link": null,
|
|
|
|
|
"text": null
|
|
|
|
|
},
|
|
|
|
|
"history": {
|
|
|
|
|
"link": null,
|
|
|
|
|
"text": null
|
|
|
|
|
},
|
|
|
|
|
"view": {
|
|
|
|
|
"link": null,
|
|
|
|
|
"text": null
|
|
|
|
|
},
|
|
|
|
|
"download": ["a_new_instrument_for_microbial_epidemiology.pdf", "a_new_instrument_for_microbial_epidemiology.epub"],
|
|
|
|
|
"search": {
|
|
|
|
|
"engine": "fuse",
|
|
|
|
|
"options": null
|
|
|
|
|
},
|
|
|
|
|
"toc": {
|
|
|
|
|
"collapse": "subsection"
|
|
|
|
|
}
|
|
|
|
|
});
|
|
|
|
|
});
|
|
|
|
|
</script>
|
|
|
|
|
|
|
|
|
|
</body>
|
|
|
|
|
|
|
|
|
|
</html>
|
