Initial class construction

Code/test_OOP.m

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+% Test Script
+
+% TO DO LIST:
+% - Display phases
+% - Heart beat reconstruction with steady respiratory phase
+% - Multislice analysis
+% - Error messages and robustness of the methods
+
+clear classes
+
+phase = Phase; % creates a Phase object
+phase.GetData; % extracts data
+
+% Should become a set method
+% User sets the workload, important to choose the correct IMF
+list = {'Rest','Exercise','Continuous Acquisition'};
+[indx,tf] = listdlg('ListString',list);
+str = list{indx};
+phase.WorkLoad = str;
+
+phase.GetSignal % gets mean intensity level of the images
+phase.GetEMD % decompose the siganl using EMD
+phase.GetPhase % turn the modes into phase information
+
+cardiac_phase = CardiacPhase(phase) % creates a CradiacPhase object
+cardiac_phase.SelectPhase % choose the right imf besed on the work load
+cardiac_phase.Diastole % detects diastolic events
+cardiac_phase.Systole % detects systolic events
+
+respiratory_phase = RespiratoryPhase(phase) % creates a RespiratoryPhase object
+respiratory_phase.SelectPhase % choose the right imf besed on the work load
+respiratory_phase.Expiration % detects expirtion moments
+respiratory_phase.Inspiration % detects inspiration moments
+
+SI = intersect(cardiac_phase.SystolePositions,respiratory_phase.InspirationPositions); % systole in inspiration
+SE = intersect(cardiac_phase.SystolePositions,respiratory_phase.ExpirationPositions); % systole in expiration
+DI = intersect(cardiac_phase.DiastolePositions,respiratory_phase.InspirationPositions); % diastole in inspiration
+DE = intersect(cardiac_phase.DiastolePositions,respiratory_phase.ExpirationPositions); % diastole in expiration
+
+% Show frames of the different cardiac/respiratory events
+phase.ShowFrames(SI,'End-systolic frames in inpiration'); 
+phase.ShowFrames(SE,'End-systolic frames in expiration');
+phase.ShowFrames(DI,'End-diastolic frames in inpiration');
+phase.ShowFrames(DE,'End-diastolic frames in expiration');
+
+% c = ImageSequence
+% c.ToBeSetByUser=15
+% c.ToBeSetByUser=true