diatoms_detector/Create True - False data.ipynb

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2018-04-10 13:04:13 +02:00
{
"cells": [
{
"cell_type": "code",
"execution_count": 61,
"metadata": {},
"outputs": [],
"source": [
"import os\n",
"import cv2\n",
"import numpy\n",
"import pickle\n",
"import skimage\n",
"from scipy.misc import imread\n",
"from xmljson import badgerfish as bf\n",
"from xml.etree.ElementTree import fromstring\n",
"from matplotlib import pyplot, rcParams\n",
"%matplotlib inline"
]
},
{
"cell_type": "code",
"execution_count": 41,
"metadata": {},
"outputs": [],
"source": [
"def negative_regions(positive):\n",
" \"\"\"Estimate some negative rectangular regions, where positive is a bitmap marking diatomenes.\n",
" First extract 200 to 800 (randomly) consequtive rows from positive. From that extract all column\n",
" sequences without positive marks. Yield those as a list of 2 slices.\"\"\"\n",
" for _ in range(3):\n",
" height = numpy.random.randint(200,800)\n",
" ymin = numpy.random.randint(0, positive.shape[0]-width)\n",
" ymax = ymin + height\n",
" has_diatomeen = positive[ymin:ymax].sum(0) == 0\n",
"\n",
" for cont in cv2.findContours(\n",
" has_diatomeen[:,None].astype(numpy.uint8),\n",
" cv2.RETR_CCOMP, cv2.CHAIN_APPROX_SIMPLE\n",
" )[1]:\n",
" if len(cont) != 2:\n",
" continue\n",
" xmin, xmax = cont[0][0][1], cont[1][0][1]\n",
" if xmax - xmin > 200 and xmax - xmin < 800:\n",
" region = [slice(ymin, ymax), slice(xmin, xmax)]\n",
" assert positive[region].sum() == 0, \"Due to a bug, some positive regions were selected as negative.\"\n",
" yield region\n",
" break"
]
},
{
"cell_type": "code",
"execution_count": 42,
"metadata": {},
"outputs": [],
"source": [
"negatives = []\n",
"positives = []\n",
"\n",
"for annotation in os.listdir('annotations/'):\n",
" with open('annotations/' + annotation) as f:\n",
" data = bf.data(fromstring(f.read()))['annotation']\n",
" filename = data['filename']['$']\n",
" try:\n",
" image = imread('images/' + filename)\n",
" except FileNotFoundError:\n",
" continue\n",
" positive = numpy.zeros(image.shape[:2]).astype(numpy.bool)\n",
" for o in data['object'] if type(data['object'])==list else [data['object']]:\n",
" region = [\n",
" slice(o['bndbox']['ymin']['$'], o['bndbox']['ymax']['$']),\n",
" slice(o['bndbox']['xmin']['$'], o['bndbox']['xmax']['$']),\n",
" ]\n",
" positive[region] = 1\n",
" positives.append(image[region])\n",
" for region in negative_regions(positive):\n",
" negatives.append(image[region])"
]
},
{
"cell_type": "code",
"execution_count": 45,
"metadata": {},
"outputs": [],
"source": [
"X = negatives + positives\n",
"y = [False] * len(negatives) + [True] * len(positives)"
]
},
{
"cell_type": "code",
"execution_count": 53,
"metadata": {
"scrolled": false
},
"outputs": [
{
"name": "stderr",
"output_type": "stream",
"text": [
"/home/herbert/.virtualenvs/medical/lib/python3.5/site-packages/matplotlib/pyplot.py:524: RuntimeWarning: More than 20 figures have been opened. Figures created through the pyplot interface (`matplotlib.pyplot.figure`) are retained until explicitly closed and may consume too much memory. (To control this warning, see the rcParam `figure.max_open_warning`).\n",
" max_open_warning, RuntimeWarning)\n"
]
},
{
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"metadata": {},
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{
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"metadata": {},
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"text/plain": [
"<matplotlib.figure.Figure at 0x7f74c41531d0>"
]
},
"metadata": {},
"output_type": "display_data"
},
{
"data": {
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"text/plain": [
"<matplotlib.figure.Figure at 0x7f74bf146780>"
]
},
"metadata": {},
"output_type": "display_data"
},
{
"data": {
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"text/plain": [
"<matplotlib.figure.Figure at 0x7f74bf83d2e8>"
]
},
"metadata": {},
"output_type": "display_data"
},
{
"data": {
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"text/plain": [
"<matplotlib.figure.Figure at 0x7f74bff936a0>"
]
},
"metadata": {},
"output_type": "display_data"
},
{
"data": {
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"text/plain": [
"<matplotlib.figure.Figure at 0x7f74c64ab978>"
]
},
"metadata": {},
"output_type": "display_data"
},
{
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"text/plain": [
"<matplotlib.figure.Figure at 0x7f74c66424a8>"
]
},
"metadata": {},
"output_type": "display_data"
},
{
"data": {
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"text/plain": [
"<matplotlib.figure.Figure at 0x7f74c7352e10>"
]
},
"metadata": {},
"output_type": "display_data"
},
{
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"text/plain": [
"<matplotlib.figure.Figure at 0x7f74c64cbe80>"
]
},
"metadata": {},
"output_type": "display_data"
},
{
"data": {
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"text/plain": [
"<matplotlib.figure.Figure at 0x7f74c71a1780>"
]
},
"metadata": {},
"output_type": "display_data"
},
{
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"text/plain": [
"<matplotlib.figure.Figure at 0x7f74c4b91a90>"
]
},
"metadata": {},
"output_type": "display_data"
},
{
"data": {
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"text/plain": [
"<matplotlib.figure.Figure at 0x7f74c6727eb8>"
]
},
"metadata": {},
"output_type": "display_data"
},
{
"data": {
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"text/plain": [
"<matplotlib.figure.Figure at 0x7f74c6eb2320>"
]
},
"metadata": {},
"output_type": "display_data"
},
{
"data": {
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"text/plain": [
"<matplotlib.figure.Figure at 0x7f74c6bee748>"
]
},
"metadata": {},
"output_type": "display_data"
},
{
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"text/plain": [
"<matplotlib.figure.Figure at 0x7f74c69d5b38>"
]
},
"metadata": {},
"output_type": "display_data"
},
{
"data": {
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"text/plain": [
"<matplotlib.figure.Figure at 0x7f74c6df80f0>"
]
},
"metadata": {},
"output_type": "display_data"
},
{
"data": {
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"text/plain": [
"<matplotlib.figure.Figure at 0x7f74c726a400>"
]
},
"metadata": {},
"output_type": "display_data"
},
{
"data": {
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"text/plain": [
"<matplotlib.figure.Figure at 0x7f74c78db828>"
]
},
"metadata": {},
"output_type": "display_data"
},
{
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"text/plain": [
"<matplotlib.figure.Figure at 0x7f74c441ac50>"
]
},
"metadata": {},
"output_type": "display_data"
},
{
"data": {
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"text/plain": [
"<matplotlib.figure.Figure at 0x7f74c680de48>"
]
},
"metadata": {},
"output_type": "display_data"
},
{
"data": {
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"text/plain": [
"<matplotlib.figure.Figure at 0x7f74c6f6a6a0>"
]
},
"metadata": {},
"output_type": "display_data"
},
{
"data": {
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"text/plain": [
"<matplotlib.figure.Figure at 0x7f74c6da4a90>"
]
},
"metadata": {},
"output_type": "display_data"
},
{
"data": {
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"text/plain": [
"<matplotlib.figure.Figure at 0x7f74c6a148d0>"
]
},
"metadata": {},
"output_type": "display_data"
},
{
"data": {
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"text/plain": [
"<matplotlib.figure.Figure at 0x7f74c4506208>"
]
},
"metadata": {},
"output_type": "display_data"
},
{
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"text/plain": [
"<matplotlib.figure.Figure at 0x7f74c6ac1630>"
]
},
"metadata": {},
"output_type": "display_data"
},
{
"data": {
"image/png": "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
"text/plain": [
"<matplotlib.figure.Figure at 0x7f74c662ba58>"
]
},
"metadata": {},
"output_type": "display_data"
},
{
"data": {
"image/png": "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
"text/plain": [
"<matplotlib.figure.Figure at 0x7f74c4b3f898>"
]
},
"metadata": {},
"output_type": "display_data"
}
],
"source": [
"rcParams['figure.figsize'] = (20,5)\n",
"axes = (axis for _ in range(10000) for axis in pyplot.subplots(1,4)[1])\n",
"\n",
"for image, class_ in zip(X, y):\n",
" if numpy.random.rand() < 0.05:\n",
" axis = next(axes)\n",
" axis.imshow(image)\n",
" axis.set_xticks([])\n",
" axis.set_yticks([])\n",
" h, w, _ = image.shape\n",
" axis.plot([w, 0, 0, w, w], [0, 0, h, h, 0], 'g' if class_ else 'r', linewidth=8)\n",
" axis.set_xlim(0, w)\n",
" axis.set_ylim(0, h)\n",
"# axis.set_ylabel('negative' if not class_ else 'positive')"
]
},
{
"cell_type": "code",
"execution_count": 62,
"metadata": {},
"outputs": [],
"source": [
"with open('true_false_data.p3', 'wb') as file:\n",
" pickle.dump((X,y), file)"
]
}
],
"metadata": {
"kernelspec": {
"display_name": "Python 3",
"language": "python",
"name": "python3"
},
"language_info": {
"codemirror_mode": {
"name": "ipython",
"version": 3
},
"file_extension": ".py",
"mimetype": "text/x-python",
"name": "python",
"nbconvert_exporter": "python",
"pygments_lexer": "ipython3",
"version": "3.5.2"
}
},
"nbformat": 4,
"nbformat_minor": 2
}