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Phase_Unwrapping_Comparison/python_code/input.yaml
MiriamLoecke 5c1efe956f added codes
2023-07-12 11:36:04 +02:00

93 lines
2.1 KiB
YAML

#################################################
#
# Input file
#
#################################################
mesh_file: '../data/slice_Hz5.7.h5'
#mesh_file: '../data/boxmeshH1.h5'
dt: 0.030
VENC: 77
#VENC: 38
shape: scalar #only scalar data right now
io:
#path to file to unwrap
in_file: '../data/slice5.7/GroundTruth_meas/postprocess/SNR6V60/'
#in_file: '../data/aorta_RH3_h1/postprocess/SNR12V60/'
#ground_file: '../data/slice5.7/GroundTruth_meas/'
#path to folder where to save results
#savepath: '../results/aorta_RH3_h1/SNR12V60_60ms/'
savepath: '../results/slice5.7/SNR6V60_30ms/'
write_checkpoints: False
write_xdmf: True
realizations:
apply: True
seed_init: 100
total_number: 50
save_all_errors: True
unwrapping:
Temporal:
apply: True
t_ref: 0
path_addon: 'temporal/'
lap3d:
apply: True
path_addon: 'lap3d/'
lap4d:
apply: True
path_addon: 'lap4d/'
Probability:
apply: True
nlow: 10
nhigh: 10
t_low: 0.32
t_high: 0.75
w_s: 1.0
w_t: 2.5
path_addon: 'prob/'
omme:
apply: True
apply_to_previous: False
#high_venc: 160
high_venc: 126
#mid_venc: 77
mid_venc: 38
#low_venc: 38
highvenc_file: '../data/slice5.7/GroundTruth_meas/'
#highvenc_file: '../data/aorta_RH3_h1/GroundTruth/'
midvenc_file: '../data/slice5.7/GroundTruth_meas/postprocess/SNR6V60/'
#midvenc_file: '../data/aorta_RH3_h1/postprocess/SNR12V60/'
#lowvenc_file: '../data/aorta_RH3_h3/postprocess/SNR12V30/'
path_addon: 'omme/'
lee:
apply: False
apply_to_previous: False
#highvenc_file: '../data/aorta_RH3_h3/GroundTruth/'
highvenc_file: '../data/slice5.7/GroundTruth_meas/'
#lowvenc_file: '../data/aorta_RH3_h3/postprocess/SNR15V60/'
lowvenc_file: '../data/slice5.7/GroundTruth_meas/postprocess/SNR12V60_s100/'
path_addon: 'lee/'
eval:
apply: True
eval_omme: False
#ground_file: '../data/aorta_RH3_h1/GroundTruth/'
ground_file: '../data/slice5.7/GroundTruth_meas/'
method: 'error'
lumen: True
save_errors: True
mesh:
mesh_type: slice
dxs: [0.25, 0.25, 0.25]