system_genetics/rnaseq/step4_multiqc/snippet.sh

forked from GRIAC/system_genetics
#!/bin/bash
module load multiqc

PROJECT_DIRECTORY="/groups/umcg-griac/tmp01/rawdata/$(whoami)/rnaseq"
multiqc "${PROJECT_DIRECTORY}"
Simple snippet on running MultiQC to collate FastQC results 2021-02-22 14:52:54 +01:00			`#!/bin/bash`
			`module load multiqc`

Made snippet input- and output files more harmonised. 2021-02-22 13:18:18 +01:00			`PROJECT_DIRECTORY="/groups/umcg-griac/tmp01/rawdata/$(whoami)/rnaseq"`
			`multiqc "${PROJECT_DIRECTORY}"`