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Made snippet input- and output files more harmonised.

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Hylke C. Donker committed 2021-02-23 09:16:39 +01:00
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commit f93596dd87
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rnaseq/step4_multiqc/snippet.sh
+2 -2
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@@ -1,5 +1,5 @@
#!/bin/bash
module load multiqc
# assuming you have all your fastQC result files in the ./fastQCresults folder
multiqc ./fastQCresults
PROJECT_DIRECTORY="/groups/umcg-griac/tmp01/rawdata/$(whoami)/rnaseq"
multiqc "${PROJECT_DIRECTORY}"