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1037d154e3
system_genetics/rnaseq
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Hylke C. Donker 1037d154e3 Small snippet that generates a genome index and aligns the RNAseq reads.
2021-02-12 14:46:05 +01:00
..
step1_fastqc Template structure. 2021-02-09 11:20:27 +01:00
step2_trim Template structure. 2021-02-09 11:20:27 +01:00
step3_align Small snippet that generates a genome index and aligns the RNAseq reads. 2021-02-12 14:46:05 +01:00
step4_multiqc Template structure. 2021-02-09 11:20:27 +01:00
step5_count Template structure. 2021-02-09 11:20:27 +01:00
step6_overall_QC Template structure. 2021-02-09 11:20:27 +01:00
umi Template structure. 2021-02-09 11:20:27 +01:00
README.md Template structure. 2021-02-09 11:20:27 +01:00

README.md

RNAseq pipeline

Snippets for the RNAseq pipeline: https://docs.google.com/document/d/1lM1wlz950Q8H6Oi7CWW28FO2tGv5nXYtW0wp8vEUizA