History

M. Berg a2bc313515 Simple snippet on running MultiQC to collate FastQC results		2021-02-22 14:52:54 +01:00
..
step1_fastqc	fastqc: simple comment. trimming: reverted back. overall qc: simplified the scripts and made sure to add instructions.	2021-02-10 13:42:51 +01:00
step2_trim	adapter comments	2021-02-15 17:03:34 +01:00
step3_align	Small snippet that generates a genome index and aligns the RNAseq reads.	2021-02-12 14:46:05 +01:00
step4_multiqc	Simple snippet on running MultiQC to collate FastQC results	2021-02-22 14:52:54 +01:00
step5_count	Template structure.	2021-02-09 11:20:27 +01:00
step6_overall_QC	Count reads in X and Y chromosome.	2021-02-15 12:54:31 +01:00
umi	Added description and some comments for UMi deduplication	2021-02-15 17:18:48 +01:00
README.md	Template structure.	2021-02-09 11:20:27 +01:00

RNAseq pipeline