Template structure.

2021-02-09 11:20:27 +01:00 · 2021-02-09 11:20:27 +01:00 · 7ecbc2aee9
parent 0dcd6ac858
commit 7ecbc2aee9
8 changed files with 3 additions and 0 deletions
--- a/rnaseq/README.md
+++ b/rnaseq/README.md
@ -0,0 +1,3 @@
+# RNAseq pipeline
+Snippets for the RNAseq pipeline:
+https://docs.google.com/document/d/1lM1wlz950Q8H6Oi7CWW28FO2tGv5nXYtW0wp8vEUizA
--- a/rnaseq/step1_fastqc/snippet.sh
+++ b/rnaseq/step1_fastqc/snippet.sh
--- a/rnaseq/step2_trim/snippet.sh
+++ b/rnaseq/step2_trim/snippet.sh
--- a/rnaseq/step3_align/snippet.sh
+++ b/rnaseq/step3_align/snippet.sh
--- a/rnaseq/step4_multiqc/snippet.sh
+++ b/rnaseq/step4_multiqc/snippet.sh
--- a/rnaseq/step5_count/snippet.sh
+++ b/rnaseq/step5_count/snippet.sh
--- a/rnaseq/step6_overall_QC/snippet.R
+++ b/rnaseq/step6_overall_QC/snippet.R
--- a/rnaseq/umi/snippet.pl
+++ b/rnaseq/umi/snippet.pl