120 lines
3.2 KiB
YAML
120 lines
3.2 KiB
YAML
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# Source: molgenis/templates/deployment.yaml
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apiVersion: apps/v1beta2
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kind: Deployment
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metadata:
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name: lanky-ragdoll-molgenis
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labels:
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app: molgenis
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chart: molgenis-0.1.0
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release: lanky-ragdoll
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heritage: Tiller
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spec:
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replicas: 1
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selector:
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matchLabels:
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app: molgenis
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release: lanky-ragdoll
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template:
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metadata:
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labels:
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app: molgenis
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release: lanky-ragdoll
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spec:
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containers:
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- name: molgenis
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image: "registry.molgenis.org/molgenis/molgenis-app:latest"
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imagePullPolicy: Always
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env:
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- name: molgenis.home
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value: /home/molgenis
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- name: opencpu.uri.host
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value: opencpu
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- name: elasticsearch.transport.addresses
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value: elasticsearch:9300
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- name: elasticsearch.cluster.name
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value: molgenis
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- name: db_uri
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value: "jdbc:postgresql://postgres/molgenis"
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- name: db_user
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value: molgenis
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- name: db_password
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value: molgenis
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- name: admin.password
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value: admin
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- name: CATALINA_OPTS
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value: "-Xmx1g -XX:+UseConcMarkSweepGC -XX:+CMSClassUnloadingEnabled"
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ports:
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- containerPort: 8080
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livenessProbe:
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httpGet:
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path: /
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port: http
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readinessProbe:
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httpGet:
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path: /api/v2/version
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port: http
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resources:
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limits:
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cpu: 1
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memory: 1250Mi
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requests:
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cpu: 200m
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memory: 1Gi
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- name: elasticsearch
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image: "docker.elastic.co/elasticsearch/elasticsearch:5.5.3"
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imagePullPolicy: IfNotPresent
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env:
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- name: cluster.name
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value: molgenis
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- name: bootstrap.memory_lock
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value: true
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- name: ES_JAVA_OPTS
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value: "-Xms512m -Xmx512m"
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- name: xpack.security.enabled
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value: false
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- name: discovery.type
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value: single-node
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ports:
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- containerPort: 9200
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- containerPort: 9300
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limits:
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cpu: 1
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memory: 1500Mi
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requests:
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cpu: 100m
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memory: 1Gi
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- name: postgres
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image: "postgres:9.6-alpine"
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imagePullPolicy: IfNotPresent
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env:
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- name: POSTGRES_USER
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value: molgenis
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- name: POSTGRES_PASSWORD
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value: molgenis
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- name: POSTGRES_DB
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value: molgenis
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ports:
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- containerPort: 5432
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limits:
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cpu: 1
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memory: 250Mi
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requests:
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cpu: 100m
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memory: 250Mi
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- name: opencpu
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image: "molgenis/opencpu:latest"
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imagePullPolicy: Always
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ports:
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- containerPort: 8004
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limits:
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cpu: 1
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memory: 512Mi
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requests:
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cpu: 100m
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memory: 256Mi
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