Merge branch 'master' of p281392/molgenis-ops-docker-helm into master
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README.md
39
README.md
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@ -33,21 +33,43 @@ When you want to use kubernetes there are some commands you need to know. Also r
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Commands that can be used to get information from a kubernetes cluster
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- ```kubectl get pods```
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**Pods**
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- ```kubectl get pods (optional: [--all-namspaces])```
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Gets alls running instances of containers from a certain deployment
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- ```kubectl get services```
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- ```kubectl describe pod #pod name# --namespace=#namesspace#```
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Describes the pod initialization, also displays error messages more accurately if they occur
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- ```kubectl remove pod #pod name# --namespace=#namespace# (optional: [--force] [--grace-period=0])```
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Removes a pod from the system (but will restart if the option is set in the deployment,yaml *[see note]*).
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**note:** You can not do this while the deployment of the service is still there
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**Services**
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- ```kubectl get services```
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Gets all services from a deployment
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**Volumes**
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- ```kubectl get pv```
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Gets all persistant volumes
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- ```kubectl get pvc```
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Gets all persistent volume claims
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**Deployments**
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- ```kubectl get deployments```
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Gets all deployments (comparable with docker-compose)
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## Remote clusters
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@ -63,7 +85,7 @@ MOLGENIS kubernetes cluster.
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*Example*:
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```bash
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# When you added the MOLGENIS configuration to the original configuration
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kubectl config user-context molgenis
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kubectl config use-context molgenis
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# or when you placed the MOLGENIS configuration besides the original one
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kubectl config use-context molgenis --kubeconfig=*full path to molgenis config*
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@ -84,6 +106,15 @@ This repository is serves also as a catalogue for Rancher. We have serveral apps
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- [HTTPD](molgenis-httpd/README.md)
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### Useful commands
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You can you need to know to easily develop and deploy helm-charts
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- ```helm lint .```
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To test your helm chart for code errors.
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- ```helm install . --dry-run --debug```
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Check if your configuration deploys on a kubernetes cluster and check the configuration
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- ```helm install .```
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@ -92,7 +123,7 @@ This repository is serves also as a catalogue for Rancher. We have serveral apps
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- ```helm list```
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Lists all installed releases
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- ```helm delete #release#a```
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- ```helm delete #release#```
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Performs a sort of mvn clean on your workspace. Very handy for zombie persistent volumes or claims.
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@ -0,0 +1,8 @@
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apiVersion: v1
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appVersion: "1.0"
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description: Nexus stack for MOLGENIS
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name: molgenis-nexus
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version: 0.2.0
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sources:
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- https://git.webhosting.rug.nl/molgenis/molgenis-ops-docker-helm.git
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icon: https://git.webhosting.rug.nl/molgenis/molgenis-ops-docker-helm/raw/master/molgenis-nexus/catalogIcon-molgenis-nexus.svg
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Before Width: | Height: | Size: 42 KiB After Width: | Height: | Size: 42 KiB |
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@ -0,0 +1,13 @@
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apiVersion: v1
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kind: Service
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metadata:
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name: {{ .Values.httpd.name }}
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labels:
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app: {{ .Values.httpd.name }}
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spec:
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type: NodePort
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ports:
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- name: {{ .Values.httpd.name }}
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port: {{ .Values.httpd.port }}
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selector:
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app: {{ .Values.httpd.selector }}
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@ -1,6 +0,0 @@
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apiVersion: v1
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appVersion: "1.0"
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description: Nexus stack for MOLGENIS
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name: molgenis-nexus
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version: 0.2.0
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icon: https://github.com/sidohaakma/molgenis-docker-helm/blob/master/nexus/catalogIcon-molgenis-nexus.svg
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