2022-08-21 16:59:35 +02:00
<!DOCTYPE html>
2024-04-23 10:39:01 +02:00
<!-- Generated by pkgdown: do not edit by hand --> < html lang = "en" > < head > < meta http-equiv = "Content-Type" content = "text/html; charset=UTF-8" > < meta charset = "utf-8" > < meta http-equiv = "X-UA-Compatible" content = "IE=edge" > < meta name = "viewport" content = "width=device-width, initial-scale=1, shrink-to-fit=no" > < meta name = "description" content = "Easy check for data availability of all columns in a data set. This makes it easy to get an idea of which antimicrobial combinations can be used for calculation with e.g. susceptibility() and resistance()." > < title > Check Availability of Columns — availability • AMR (for R)< / title > <!-- favicons --> < link rel = "icon" type = "image/png" sizes = "16x16" href = "../favicon-16x16.png" > < link rel = "icon" type = "image/png" sizes = "32x32" href = "../favicon-32x32.png" > < link rel = "apple-touch-icon" type = "image/png" sizes = "180x180" href = "../apple-touch-icon.png" > < link rel = "apple-touch-icon" type = "image/png" sizes = "120x120" href = "../apple-touch-icon-120x120.png" > < link rel = "apple-touch-icon" type = "image/png" sizes = "76x76" href = "../apple-touch-icon-76x76.png" > < link rel = "apple-touch-icon" type = "image/png" sizes = "60x60" href = "../apple-touch-icon-60x60.png" > < script src = "../deps/jquery-3.6.0/jquery-3.6.0.min.js" > < / script > < meta name = "viewport" content = "width=device-width, initial-scale=1, shrink-to-fit=no" > < link href = "../deps/bootstrap-5.3.1/bootstrap.min.css" rel = "stylesheet" > < script src = "../deps/bootstrap-5.3.1/bootstrap.bundle.min.js" > < / script > < link href = "../deps/Lato-0.4.9/font.css" rel = "stylesheet" > < link href = "../deps/Fira_Code-0.4.9/font.css" rel = "stylesheet" > <!-- Font Awesome icons --> < link rel = "stylesheet" href = "https://cdnjs.cloudflare.com/ajax/libs/font-awesome/5.12.1/css/all.min.css" integrity = "sha256-mmgLkCYLUQbXn0B1SRqzHar6dCnv9oZFPEC1g1cwlkk=" crossorigin = "anonymous" > < link rel = "stylesheet" href = "https://cdnjs.cloudflare.com/ajax/libs/font-awesome/5.12.1/css/v4-shims.min.css" integrity = "sha256-wZjR52fzng1pJHwx4aV2AO3yyTOXrcDW7jBpJtTwVxw=" crossorigin = "anonymous" > <!-- bootstrap - toc --> < script src = "https://cdn.jsdelivr.net/gh/afeld/bootstrap-toc@v1.0.1/dist/bootstrap-toc.min.js" integrity = "sha256-4veVQbu7//Lk5TSmc7YV48MxtMy98e26cf5MrgZYnwo=" crossorigin = "anonymous" > < / script > <!-- headroom.js --> < script src = "https://cdnjs.cloudflare.com/ajax/libs/headroom/0.11.0/headroom.min.js" integrity = "sha256-AsUX4SJE1+yuDu5+mAVzJbuYNPHj/WroHuZ8Ir/CkE0=" crossorigin = "anonymous" > < / script > < script src = "https://cdnjs.cloudflare.com/ajax/libs/headroom/0.11.0/jQuery.headroom.min.js" integrity = "sha256-ZX/yNShbjqsohH1k95liqY9Gd8uOiE1S4vZc+9KQ1K4=" crossorigin = "anonymous" > < / script > <!-- clipboard.js --> < script src = "https://cdnjs.cloudflare.com/ajax/libs/clipboard.js/2.0.11/clipboard.min.js" integrity = "sha512-7O5pXpc0oCRrxk8RUfDYFgn0nO1t+jLuIOQdOMRp4APB7uZ4vSjspzp5y6YDtDs4VzUSTbWzBFZ/LKJhnyFOKw==" crossorigin = "anonymous" referrerpolicy = "no-referrer" > < / script > <!-- search --> < script src = "https://cdnjs.cloudflare.com/ajax/libs/fuse.js/6.4.6/fuse.js" integrity = "sha512-zv6Ywkjyktsohkbp9bb45V6tEMoWhzFzXis+LrMehmJZZSys19Yxf1dopHx7WzIKxr5tK2dVcYmaCk2uqdjF4A==" crossorigin = "anonymous" > < / script > < script src = "https://cdnjs.cloudflare.com/ajax/libs/autocomplete.js/0.38.0/autocomplete.jquery.min.js" integrity = "sha512-GU9ayf+66Xx2TmpxqJpliWbT5PiGYxpaG8rfnBEk1LL8l1KGkRShhngwdXK1UgqhAzWpZHSiYPc09/NwDQIGyg==" crossorigin = "anonymous" > < / script > < script src = "https://cdnjs.cloudflare.com/ajax/libs/mark.js/8.11.1/mark.min.js" integrity = "sha512-5CYOlHXGh6QpOFA/TeTylKLWfB3ftPsde7AnmhuitiTX4K5SqCLBeKro6sPS8ilsz1Q4NRx3v8Ko2IBiszzdww==" crossorigin = "anonymous" > < / script > <!-- pkgdown --> < script src = "../pkgdown.js" > < / script > < link href = "../extra.css" rel = "stylesheet" > < script src = "../extra.js" > < / script > < meta property = "og:title" content = "Check Availability of Columns — availability" > < meta property = "og:description" content = "Easy check for data availability of all columns in a data set. This makes it easy to get an idea of which antimicrobial combinations can be used for calculation with e.g. susceptibility() and resistance()." > < meta property = "og:image" content = "https://m
2022-08-21 16:59:35 +02:00
< script src = "https://oss.maxcdn.com/html5shiv/3.7.3/html5shiv.min.js" > < / script >
< script src = "https://oss.maxcdn.com/respond/1.4.2/respond.min.js" > < / script >
<![endif]--> < / head > < body >
< a href = "#main" class = "visually-hidden-focusable" > Skip to contents< / a >
2024-04-19 10:24:46 +02:00
< nav class = "navbar fixed-top navbar-dark navbar-expand-lg bg-primary" data-bs-theme = "dark" > < div class = "container" >
2022-08-21 16:59:35 +02:00
< a class = "navbar-brand me-2" href = "../index.html" > AMR (for R)< / a >
2024-05-30 16:45:24 +02:00
< small class = "nav-text text-muted me-auto" data-bs-toggle = "tooltip" data-bs-placement = "bottom" title = "" > 2.1.1.9035< / small >
2022-08-21 16:59:35 +02:00
< button class = "navbar-toggler" type = "button" data-bs-toggle = "collapse" data-bs-target = "#navbar" aria-controls = "navbar" aria-expanded = "false" aria-label = "Toggle navigation" >
< span class = "navbar-toggler-icon" > < / span >
< / button >
< div id = "navbar" class = "collapse navbar-collapse ms-3" >
2023-05-24 16:03:18 +02:00
< ul class = "navbar-nav me-auto" > < li class = "nav-item dropdown" >
2022-08-21 16:59:35 +02:00
< a href = "#" class = "nav-link dropdown-toggle" data-bs-toggle = "dropdown" role = "button" aria-expanded = "false" aria-haspopup = "true" id = "dropdown--how-to" >
< span class = "fa fa-question-circle" > < / span >
How to
< / a >
< div class = "dropdown-menu" aria-labelledby = "dropdown--how-to" >
< a class = "dropdown-item" href = "../articles/AMR.html" >
< span class = "fa fa-directions" > < / span >
2023-01-23 20:14:37 +01:00
Conduct AMR Analysis
2022-08-21 16:59:35 +02:00
< / a >
2023-02-08 17:01:47 +01:00
< a class = "dropdown-item" href = "../reference/antibiogram.html" >
< span class = "fa fa-file-prescription" > < / span >
Generate Antibiogram (Trad./Syndromic/WISCA)
< / a >
2022-08-21 16:59:35 +02:00
< a class = "dropdown-item" href = "../articles/resistance_predict.html" >
< span class = "fa fa-dice" > < / span >
2023-01-23 20:14:37 +01:00
Predict Antimicrobial Resistance
2022-08-21 16:59:35 +02:00
< / a >
< a class = "dropdown-item" href = "../articles/datasets.html" >
< span class = "fa fa-database" > < / span >
2023-02-26 21:34:01 +01:00
Download Data Sets for Own Use
< / a >
< a class = "dropdown-item" href = "../reference/AMR-options.html" >
< span class = "fa fa-gear" > < / span >
Set User- Or Team-specific Package Settings
2022-08-21 16:59:35 +02:00
< / a >
< a class = "dropdown-item" href = "../articles/PCA.html" >
< span class = "fa fa-compress" > < / span >
2023-01-23 20:14:37 +01:00
Conduct Principal Component Analysis for AMR
2022-08-21 16:59:35 +02:00
< / a >
< a class = "dropdown-item" href = "../articles/MDR.html" >
< span class = "fa fa-skull-crossbones" > < / span >
2023-01-23 20:14:37 +01:00
Determine Multi-Drug Resistance (MDR)
2022-08-21 16:59:35 +02:00
< / a >
< a class = "dropdown-item" href = "../articles/WHONET.html" >
< span class = "fa fa-globe-americas" > < / span >
2023-01-23 20:14:37 +01:00
Work with WHONET Data
2022-08-21 16:59:35 +02:00
< / a >
< a class = "dropdown-item" href = "../articles/EUCAST.html" >
< span class = "fa fa-exchange-alt" > < / span >
2023-01-23 20:14:37 +01:00
Apply Eucast Rules
2022-08-21 16:59:35 +02:00
< / a >
< a class = "dropdown-item" href = "../reference/mo_property.html" >
< span class = "fa fa-bug" > < / span >
2023-01-23 20:14:37 +01:00
Get Taxonomy of a Microorganism
2022-08-21 16:59:35 +02:00
< / a >
< a class = "dropdown-item" href = "../reference/ab_property.html" >
< span class = "fa fa-capsules" > < / span >
2023-01-23 20:14:37 +01:00
Get Properties of an Antibiotic Drug
2022-08-21 16:59:35 +02:00
< / a >
2022-11-13 08:54:32 +01:00
< a class = "dropdown-item" href = "../reference/av_property.html" >
< span class = "fa fa-capsules" > < / span >
2023-01-23 20:14:37 +01:00
Get Properties of an Antiviral Drug
2022-11-13 08:54:32 +01:00
< / a >
2022-08-21 16:59:35 +02:00
< / div >
< / li >
2023-05-24 16:03:18 +02:00
< li class = "nav-item dropdown" >
< a href = "#" class = "nav-link dropdown-toggle" data-bs-toggle = "dropdown" role = "button" aria-expanded = "false" aria-haspopup = "true" id = "dropdown--with-other-pkgs" >
2023-05-27 10:53:23 +02:00
< span class = "fa fa-layer-group" > < / span >
2023-05-24 16:03:18 +02:00
With other pkgs
< / a >
< div class = "dropdown-menu" aria-labelledby = "dropdown--with-other-pkgs" >
< a class = "dropdown-item" href = "../articles/other_pkg.html" >
2023-05-27 10:53:23 +02:00
< span class = "fa fa-layer-group" > < / span >
2023-05-24 16:03:18 +02:00
AMR & dplyr/tidyverse
< / a >
< a class = "dropdown-item" href = "../articles/other_pkg.html" >
2023-05-27 10:53:23 +02:00
< span class = "fa fa-layer-group" > < / span >
2023-05-24 16:03:18 +02:00
AMR & data.table
< / a >
< a class = "dropdown-item" href = "../articles/other_pkg.html" >
2023-05-27 10:53:23 +02:00
< span class = "fa fa-layer-group" > < / span >
2023-05-24 16:03:18 +02:00
AMR & tidymodels
< / a >
< a class = "dropdown-item" href = "../articles/other_pkg.html" >
2023-05-27 10:53:23 +02:00
< span class = "fa fa-layer-group" > < / span >
2023-05-24 16:03:18 +02:00
AMR & base R
< / a >
< / div >
< / li >
2022-08-21 16:59:35 +02:00
< li class = "active nav-item" >
< a class = "nav-link" href = "../reference/index.html" >
< span class = "fa fa-book-open" > < / span >
Manual
< / a >
< / li >
< li class = "nav-item" >
< a class = "nav-link" href = "../authors.html" >
< span class = "fa fa-users" > < / span >
Authors
< / a >
< / li >
2023-05-24 16:03:18 +02:00
< / ul > < form class = "form-inline my-2 my-lg-0" role = "search" >
< input type = "search" class = "form-control me-sm-2" aria-label = "Toggle navigation" name = "search-input" data-search-index = "../search.json" id = "search-input" placeholder = "Search for" autocomplete = "off" > < / form >
< ul class = "navbar-nav" > < li class = "nav-item" >
2022-08-21 16:59:35 +02:00
< a class = "nav-link" href = "../news/index.html" >
< span class = "far fa far fa-newspaper" > < / span >
Changelog
< / a >
< / li >
2023-05-24 16:03:18 +02:00
< li class = "nav-item" >
2022-08-21 16:59:35 +02:00
< a class = "external-link nav-link" href = "https://github.com/msberends/AMR" >
< span class = "fab fa fab fa-github" > < / span >
Source Code
< / a >
< / li >
< / ul > < / div >
< / div >
< / nav > < div class = "container template-reference-topic" >
< div class = "row" >
< main id = "main" class = "col-md-9" > < div class = "page-header" >
< img src = "../logo.svg" class = "logo" alt = "" > < h1 > Check Availability of Columns< / h1 >
< small class = "dont-index" > Source: < a href = "https://github.com/msberends/AMR/blob/HEAD/R/availability.R" class = "external-link" > < code > R/availability.R< / code > < / a > < / small >
< div class = "d-none name" > < code > availability.Rd< / code > < / div >
< / div >
< div class = "ref-description section level2" >
< p > Easy check for data availability of all columns in a data set. This makes it easy to get an idea of which antimicrobial combinations can be used for calculation with e.g. < code > < a href = "proportion.html" > susceptibility()< / a > < / code > and < code > < a href = "proportion.html" > resistance()< / a > < / code > .< / p >
< / div >
< div class = "section level2" >
< h2 id = "ref-usage" > Usage< a class = "anchor" aria-label = "anchor" href = "#ref-usage" > < / a > < / h2 >
< div class = "sourceCode" > < pre class = "sourceCode r" > < code > < span > < span class = "fu" > availability< / span > < span class = "op" > (< / span > < span class = "va" > tbl< / span > , width < span class = "op" > =< / span > < span class = "cn" > NULL< / span > < span class = "op" > )< / span > < / span > < / code > < / pre > < / div >
< / div >
< div class = "section level2" >
< h2 id = "arguments" > Arguments< a class = "anchor" aria-label = "anchor" href = "#arguments" > < / a > < / h2 >
< dl > < dt > tbl< / dt >
< dd > < p > a < a href = "https://rdrr.io/r/base/data.frame.html" class = "external-link" > data.frame< / a > or < a href = "https://rdrr.io/r/base/list.html" class = "external-link" > list< / a > < / p > < / dd >
< dt > width< / dt >
2023-02-22 14:47:35 +01:00
< dd > < p > number of characters to present the visual availability - the default is filling the width of the console< / p > < / dd >
2022-08-21 16:59:35 +02:00
< / dl > < / div >
< div class = "section level2" >
< h2 id = "value" > Value< a class = "anchor" aria-label = "anchor" href = "#value" > < / a > < / h2 >
< p > < a href = "https://rdrr.io/r/base/data.frame.html" class = "external-link" > data.frame< / a > with column names of < code > tbl< / code > as row names< / p >
< / div >
< div class = "section level2" >
< h2 id = "details" > Details< a class = "anchor" aria-label = "anchor" href = "#details" > < / a > < / h2 >
< p > The function returns a < a href = "https://rdrr.io/r/base/data.frame.html" class = "external-link" > data.frame< / a > with columns < code > "resistant"< / code > and < code > "visual_resistance"< / code > . The values in that columns are calculated with < code > < a href = "proportion.html" > resistance()< / a > < / code > .< / p >
< / div >
< div class = "section level2" >
< h2 id = "ref-examples" > Examples< a class = "anchor" aria-label = "anchor" href = "#ref-examples" > < / a > < / h2 >
< div class = "sourceCode" > < pre class = "sourceCode r" > < code > < span class = "r-in" > < span > < span class = "fu" > availability< / span > < span class = "op" > (< / span > < span class = "va" > example_isolates< / span > < span class = "op" > )< / span > < / span > < / span >
2022-08-28 22:45:38 +02:00
< span class = "r-out co" > < span class = "r-pr" > #> < / span > count available visual_availabilty resistant visual_resistance< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > date 2000 100.0% |####################| < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > patient 2000 100.0% |####################| < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > age 2000 100.0% |####################| < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > gender 2000 100.0% |####################| < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > ward 2000 100.0% |####################| < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > mo 2000 100.0% |####################| < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > PEN 1629 81.5% |################----| 73.7% |##############------|< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > OXA 365 18.3% |###-----------------| 31.2% |######--------------|< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > FLC 943 47.2% |#########-----------| 29.5% |#####---------------|< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > AMX 1350 67.5% |#############-------| 59.6% |###########---------|< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > AMC 1879 94.0% |##################--| 23.7% |####----------------|< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > AMP 1350 67.5% |#############-------| 59.6% |###########---------|< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > TZP 1001 50.0% |##########----------| 12.6% |##------------------|< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > CZO 446 22.3% |####----------------| 44.6% |########------------|< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > FEP 724 36.2% |#######-------------| 14.2% |##------------------|< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > CXM 1789 89.5% |#################---| 26.3% |#####---------------|< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > FOX 818 40.9% |########------------| 27.4% |#####---------------|< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > CTX 943 47.2% |#########-----------| 15.5% |###-----------------|< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > CAZ 1811 90.6% |##################--| 66.5% |#############-------|< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > CRO 943 47.2% |#########-----------| 15.5% |###-----------------|< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > GEN 1855 92.8% |##################--| 24.6% |####----------------|< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > TOB 1351 67.6% |#############-------| 34.4% |######--------------|< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > AMK 692 34.6% |######--------------| 63.7% |############--------|< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > KAN 471 23.6% |####----------------| 100.0% |####################|< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > TMP 1499 75.0% |###############-----| 38.1% |#######-------------|< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > SXT 1759 88.0% |#################---| 20.5% |####----------------|< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > NIT 743 37.2% |#######-------------| 17.1% |###-----------------|< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > FOS 351 17.6% |###-----------------| 42.2% |########------------|< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > LNZ 1023 51.2% |##########----------| 69.3% |#############-------|< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > CIP 1409 70.5% |#############-------| 16.2% |###-----------------|< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > MFX 211 10.6% |##------------------| 33.6% |######--------------|< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > VAN 1861 93.1% |##################--| 38.3% |#######-------------|< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > TEC 976 48.8% |#########-----------| 75.7% |###############-----|< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > TCY 1200 60.0% |###########---------| 29.8% |#####---------------|< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > TGC 798 39.9% |########------------| 12.7% |##------------------|< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > DOX 1136 56.8% |###########---------| 27.7% |#####---------------|< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > ERY 1894 94.7% |##################--| 57.2% |###########---------|< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > CLI 1520 76.0% |###############-----| 61.2% |############--------|< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > AZM 1894 94.7% |##################--| 57.2% |###########---------|< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > IPM 889 44.5% |########------------| 6.2% |#-------------------|< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > MEM 829 41.5% |########------------| 5.9% |#-------------------|< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > MTR 34 1.7% |--------------------| 14.7% |##------------------|< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > CHL 154 7.7% |#-------------------| 21.4% |####----------------|< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > COL 1640 82.0% |################----| 81.2% |################----|< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > MUP 270 13.5% |##------------------| 5.9% |#-------------------|< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > RIF 1003 50.2% |##########----------| 69.6% |#############-------|< / span >
2022-08-21 16:59:35 +02:00
< span class = "r-in" > < span > < span class = "co" > # \donttest{< / span > < / span > < / span >
< span class = "r-in" > < span > < span class = "kw" > if< / span > < span class = "op" > (< / span > < span class = "kw" > < a href = "https://rdrr.io/r/base/library.html" class = "external-link" > require< / a > < / span > < span class = "op" > (< / span > < span class = "st" > < a href = "https://dplyr.tidyverse.org" class = "external-link" > "dplyr"< / a > < / span > < span class = "op" > )< / span > < span class = "op" > )< / span > < span class = "op" > {< / span > < / span > < / span >
< span class = "r-in" > < span > < span class = "va" > example_isolates< / span > < span class = "op" > < a href = "https://magrittr.tidyverse.org/reference/pipe.html" class = "external-link" > %> %< / a > < / span > < / span > < / span >
2022-08-28 22:45:38 +02:00
< span class = "r-in" > < span > < span class = "fu" > < a href = "https://dplyr.tidyverse.org/reference/filter.html" class = "external-link" > filter< / a > < / span > < span class = "op" > (< / span > < span class = "va" > mo< / span > < span class = "op" > ==< / span > < span class = "fu" > < a href = "as.mo.html" > as.mo< / a > < / span > < span class = "op" > (< / span > < span class = "st" > "Escherichia coli"< / span > < span class = "op" > )< / span > < span class = "op" > )< / span > < span class = "op" > < a href = "https://magrittr.tidyverse.org/reference/pipe.html" class = "external-link" > %> %< / a > < / span > < / span > < / span >
2023-01-21 23:53:21 +01:00
< span class = "r-in" > < span > < span class = "fu" > < a href = "https://dplyr.tidyverse.org/reference/select_all.html" class = "external-link" > select_if< / a > < / span > < span class = "op" > (< / span > < span class = "va" > is.sir< / span > < span class = "op" > )< / span > < span class = "op" > < a href = "https://magrittr.tidyverse.org/reference/pipe.html" class = "external-link" > %> %< / a > < / span > < / span > < / span >
2022-08-21 16:59:35 +02:00
< span class = "r-in" > < span > < span class = "fu" > availability< / span > < span class = "op" > (< / span > < span class = "op" > )< / span > < / span > < / span >
< span class = "r-in" > < span > < span class = "op" > }< / span > < / span > < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > count available visual_availabilty resistant visual_resistance< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > PEN 467 100.0% |######################| 100.0% |######################|< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > OXA 0 0.0% |----------------------| < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > FLC 0 0.0% |----------------------| < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > AMX 392 83.9% |##################----| 50.0% |###########-----------|< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > AMC 467 100.0% |######################| 13.1% |##--------------------|< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > AMP 392 83.9% |##################----| 50.0% |###########-----------|< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > TZP 416 89.1% |###################---| 5.5% |#---------------------|< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > CZO 82 17.6% |###-------------------| 2.4% |----------------------|< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > FEP 317 67.9% |##############--------| 2.8% |----------------------|< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > CXM 465 99.6% |######################| 5.4% |#---------------------|< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > FOX 377 80.7% |#################-----| 6.9% |#---------------------|< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > CTX 459 98.3% |#####################-| 2.4% |----------------------|< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > CAZ 460 98.5% |#####################-| 2.4% |----------------------|< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > CRO 459 98.3% |#####################-| 2.4% |----------------------|< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > GEN 460 98.5% |#####################-| 2.0% |----------------------|< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > TOB 462 98.9% |#####################-| 2.6% |----------------------|< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > AMK 171 36.6% |########--------------| 0.0% |----------------------|< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > KAN 0 0.0% |----------------------| < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > TMP 396 84.8% |##################----| 39.1% |########--------------|< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > SXT 465 99.6% |######################| 31.6% |######----------------|< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > NIT 458 98.1% |#####################-| 2.8% |----------------------|< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > FOS 61 13.1% |##--------------------| 0.0% |----------------------|< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > LNZ 467 100.0% |######################| 100.0% |######################|< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > CIP 456 97.6% |#####################-| 12.5% |##--------------------|< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > MFX 57 12.2% |##--------------------| 100.0% |######################|< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > VAN 467 100.0% |######################| 100.0% |######################|< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > TEC 467 100.0% |######################| 100.0% |######################|< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > TCY 3 0.6% |----------------------| 66.7% |##############--------|< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > TGC 68 14.6% |###-------------------| 0.0% |----------------------|< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > DOX 0 0.0% |----------------------| < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > ERY 467 100.0% |######################| 100.0% |######################|< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > CLI 467 100.0% |######################| 100.0% |######################|< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > AZM 467 100.0% |######################| 100.0% |######################|< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > IPM 422 90.4% |###################---| 0.0% |----------------------|< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > MEM 418 89.5% |###################---| 0.0% |----------------------|< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > MTR 2 0.4% |----------------------| 0.0% |----------------------|< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > CHL 0 0.0% |----------------------| < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > COL 240 51.4% |###########-----------| 0.0% |----------------------|< / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > MUP 0 0.0% |----------------------| < / span >
< span class = "r-out co" > < span class = "r-pr" > #> < / span > RIF 467 100.0% |######################| 100.0% |######################|< / span >
< span class = "r-in" > < span > < span class = "co" > # }< / span > < / span > < / span >
< / code > < / pre > < / div >
< / div >
< / main > < aside class = "col-md-3" > < nav id = "toc" > < h2 > On this page< / h2 >
< / nav > < / aside > < / div >
< footer > < div class = "pkgdown-footer-left" >
2024-04-23 10:39:01 +02:00
< p > < code > AMR< / code > (for R). Free and open-source, licenced under the < a target = "_blank" href = "https://github.com/msberends/AMR/blob/main/LICENSE" class = "external-link" > GNU General Public License version 2.0 (GPL-2)< / a > .< br > Developed at the < a target = "_blank" href = "https://www.rug.nl" class = "external-link" > University of Groningen< / a > and < a target = "_blank" href = "https://www.umcg.nl" class = "external-link" > University Medical Center Groningen< / a > in The Netherlands.< / p >
2022-08-21 16:59:35 +02:00
< / div >
< div class = "pkgdown-footer-right" >
2024-04-23 10:39:01 +02:00
< p > < a target = "_blank" href = "https://www.rug.nl" class = "external-link" > < img src = "https://github.com/msberends/AMR/raw/main/pkgdown/logos/logo_rug.svg" style = "max-width: 150px;" > < / a > < a target = "_blank" href = "https://www.umcg.nl" class = "external-link" > < img src = "https://github.com/msberends/AMR/raw/main/pkgdown/logos/logo_umcg.svg" style = "max-width: 150px;" > < / a > < / p >
2022-08-21 16:59:35 +02:00
< / div >
< / footer > < / div >
< / body > < / html >
