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Conduct AMR analysis
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Predict antimicrobial resistance
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Conduct principal component analysis for AMR
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Determine multi-drug resistance (MDR)
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Work with WHONET data
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Get properties of a microorganism
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Get properties of an antibiotic
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< h1 > WHOCC: WHO Collaborating Centre for Drug Statistics Methodology< / h1 >
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< small class = "dont-index" > Source: < a href = 'https://github.com/msberends/AMR/blob/master/R/whocc.R' > < code > R/whocc.R< / code > < / a > < / small >
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< div class = "hidden name" > < code > WHOCC.Rd< / code > < / div >
< / div >
< div class = "ref-description" >
< p > All antimicrobial drugs and their official names, ATC codes, ATC groups and defined daily dose (DDD) are included in this package, using the WHO Collaborating Centre for Drug Statistics Methodology.< / p >
< / div >
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< h2 class = "hasAnchor" id = "whocc" > < a class = "anchor" href = "#whocc" > < / a > WHOCC< / h2 >
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< p > < img src = 'figures/logo_who.png' height = 60px style = margin-bottom:5px / > < br / >
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This package contains < strong > all ~550 antibiotic, antimycotic and antiviral drugs< / strong > and their Anatomical Therapeutic Chemical (ATC) codes, ATC groups and Defined Daily Dose (DDD) from the World Health Organization Collaborating Centre for Drug Statistics Methodology (WHOCC, < a href = 'https://www.whocc.no' > https://www.whocc.no< / a > ) and the Pharmaceuticals Community Register of the European Commission (< a href = 'https://ec.europa.eu/health/documents/community-register/html/reg_hum_atc.htm' > https://ec.europa.eu/health/documents/community-register/html/reg_hum_atc.htm< / a > ).< / p >
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< p > These have become the gold standard for international drug utilisation monitoring and research.< / p >
< p > The WHOCC is located in Oslo at the Norwegian Institute of Public Health and funded by the Norwegian government. The European Commission is the executive of the European Union and promotes its general interest.< / p >
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< p > < strong > NOTE: The WHOCC copyright does not allow use for commercial purposes, unlike any other info from this package.< / strong > See < a href = 'https://www.whocc.no/copyright_disclaimer/.' > https://www.whocc.no/copyright_disclaimer/.< / a > < / p >
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< h2 class = "hasAnchor" id = "read-more-on-our-website-" > < a class = "anchor" href = "#read-more-on-our-website-" > < / a > Read more on Our Website!< / h2 >
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< p > On our website < a href = 'https://msberends.github.io/AMR/' > https://msberends.github.io/AMR/< / a > you can find < a href = 'https://msberends.github.io/AMR/articles/AMR.html' > a comprehensive tutorial< / a > about how to conduct AMR data analysis, the < a href = 'https://msberends.github.io/AMR/reference/' > complete documentation of all functions< / a > and < a href = 'https://msberends.github.io/AMR/articles/WHONET.html' > an example analysis using WHONET data< / a > .< / p >
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< h2 class = "hasAnchor" id = "examples" > < a class = "anchor" href = "#examples" > < / a > Examples< / h2 >
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< pre class = "examples" > < span class = 'fu' > < a href = 'as.ab.html' > as.ab< / a > < / span > < span class = 'op' > (< / span > < span class = 'st' > "meropenem"< / span > < span class = 'op' > )< / span >
< span class = 'fu' > < a href = 'ab_property.html' > ab_name< / a > < / span > < span class = 'op' > (< / span > < span class = 'st' > "J01DH02"< / span > < span class = 'op' > )< / span >
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< span class = 'fu' > < a href = 'ab_property.html' > ab_tradenames< / a > < / span > < span class = 'op' > (< / span > < span class = 'st' > "flucloxacillin"< / span > < span class = 'op' > )< / span >
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< p > Developed by < a href = 'https://www.rug.nl/staff/m.s.berends/' > Matthijs S. Berends< / a > , < a href = 'https://www.rug.nl/staff/c.f.luz/' > Christian F. Luz< / a > , < a href = 'https://www.rug.nl/staff/a.w.friedrich/' > Alexander W. Friedrich< / a > , < a href = 'https://www.rug.nl/staff/b.sinha/' > Bhanu N. M. Sinha< / a > , < a href = 'https://www.rug.nl/staff/c.j.albers/' > Casper J. Albers< / a > , < a href = 'https://www.rug.nl/staff/c.glasner/' > Corinna Glasner< / a > .< / p >
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< p > Site built with < a href = "https://pkgdown.r-lib.org/" > pkgdown< / a > 1.6.1.< / p >
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