2018-12-16 22:45:12 +01:00
|
|
|
# ==================================================================== #
|
2023-07-08 17:30:05 +02:00
|
|
|
# TITLE: #
|
2022-10-05 09:12:22 +02:00
|
|
|
# AMR: An R Package for Working with Antimicrobial Resistance Data #
|
2018-12-16 22:45:12 +01:00
|
|
|
# #
|
2023-07-08 17:30:05 +02:00
|
|
|
# SOURCE CODE: #
|
2020-07-08 14:48:06 +02:00
|
|
|
# https://github.com/msberends/AMR #
|
2018-12-16 22:45:12 +01:00
|
|
|
# #
|
2023-07-08 17:30:05 +02:00
|
|
|
# PLEASE CITE THIS SOFTWARE AS: #
|
2024-07-16 14:51:57 +02:00
|
|
|
# Berends MS, Luz CF, Friedrich AW, et al. (2022). #
|
|
|
|
|
# AMR: An R Package for Working with Antimicrobial Resistance Data. #
|
|
|
|
|
# Journal of Statistical Software, 104(3), 1-31. #
|
2023-05-27 10:39:22 +02:00
|
|
|
# https://doi.org/10.18637/jss.v104.i03 #
|
2022-10-05 09:12:22 +02:00
|
|
|
# #
|
2022-12-27 15:16:15 +01:00
|
|
|
# Developed at the University of Groningen and the University Medical #
|
|
|
|
|
# Center Groningen in The Netherlands, in collaboration with many #
|
|
|
|
|
# colleagues from around the world, see our website. #
|
2018-12-16 22:45:12 +01:00
|
|
|
# #
|
2019-01-02 23:24:07 +01:00
|
|
|
# This R package is free software; you can freely use and distribute #
|
|
|
|
|
# it for both personal and commercial purposes under the terms of the #
|
|
|
|
|
# GNU General Public License version 2.0 (GNU GPL-2), as published by #
|
|
|
|
|
# the Free Software Foundation. #
|
2020-01-05 17:22:09 +01:00
|
|
|
# We created this package for both routine data analysis and academic #
|
|
|
|
|
# research and it was publicly released in the hope that it will be #
|
|
|
|
|
# useful, but it comes WITHOUT ANY WARRANTY OR LIABILITY. #
|
2020-10-08 11:16:03 +02:00
|
|
|
# #
|
|
|
|
|
# Visit our website for the full manual and a complete tutorial about #
|
2021-02-02 23:57:35 +01:00
|
|
|
# how to conduct AMR data analysis: https://msberends.github.io/AMR/ #
|
2018-12-16 22:45:12 +01:00
|
|
|
# ==================================================================== #
|
|
|
|
|
|
2021-05-15 21:36:22 +02:00
|
|
|
expect_inherits(random_mic(100), "mic")
|
|
|
|
|
expect_inherits(random_mic(100, mo = "Klebsiella pneumoniae"), "mic")
|
|
|
|
|
expect_inherits(random_mic(100, mo = "Klebsiella pneumoniae", ab = "meropenem"), "mic")
|
|
|
|
|
expect_inherits(random_mic(100, ab = "meropenem"), "mic")
|
|
|
|
|
# no normal factors of 2
|
|
|
|
|
expect_inherits(random_mic(100, "Haemophilus influenzae", "ceftaroline"), "mic")
|
|
|
|
|
expect_inherits(random_disk(100), "disk")
|
|
|
|
|
expect_inherits(random_disk(100, mo = "Klebsiella pneumoniae"), "disk")
|
|
|
|
|
expect_inherits(random_disk(100, mo = "Klebsiella pneumoniae", ab = "meropenem"), "disk")
|
|
|
|
|
expect_inherits(random_disk(100, ab = "meropenem"), "disk")
|
2023-01-21 23:47:20 +01:00
|
|
|
expect_inherits(random_sir(100), "sir")
|
