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(v1.3.0.9030) matching score update

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dr. M.S. (Matthijs) Berends
2020-09-26 16:26:01 +02:00
parent 9667c2994f
commit 050a9a04fb
33 changed files with 249 additions and 175 deletions
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tests/testthat/test-count.R
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@@ -37,7 +37,7 @@ test_that("counts work", {
expect_equal(suppressWarnings(count_S(example_isolates$AMX)) + count_I(example_isolates$AMX),
count_SI(example_isolates$AMX))
library(dplyr)
library(dplyr, warn.conflicts = FALSE)
expect_equal(example_isolates %>% count_susceptible(AMC), 1433)
expect_equal(example_isolates %>% count_susceptible(AMC, GEN, only_all_tested = TRUE), 1687)
expect_equal(example_isolates %>% count_susceptible(AMC, GEN, only_all_tested = FALSE), 1764)