(v2.1.1.9123) add EFF code to antibiotics data set

PythonPackage/AMR/AMR.egg-info/PKG-INFO

@@ -1,6 +1,6 @@
-Metadata-Version: 2.1
+Metadata-Version: 2.2
 Name: AMR
-Version: 2.1.1.9122
+Version: 2.1.1.9123
 Summary: A Python wrapper for the AMR R package
 Home-page: https://github.com/msberends/AMR
 Author: Matthijs Berends
@@ -14,6 +14,17 @@ Description-Content-Type: text/markdown
 Requires-Dist: rpy2
 Requires-Dist: numpy
 Requires-Dist: pandas
+Dynamic: author
+Dynamic: author-email
+Dynamic: classifier
+Dynamic: description
+Dynamic: description-content-type
+Dynamic: home-page
+Dynamic: license
+Dynamic: project-url
+Dynamic: requires-dist
+Dynamic: requires-python
+Dynamic: summary
 
 ---
 title: "AMR for Python"

PythonPackage/AMR/AMR/__init__.py

@@ -47,6 +47,7 @@ from .functions import macrolides
 from .functions import nitrofurans
 from .functions import oxazolidinones
 from .functions import penicillins
+from .functions import phenicols
 from .functions import polymyxins
 from .functions import quinolones
 from .functions import rifamycins

PythonPackage/AMR/AMR/functions.py

@@ -171,6 +171,9 @@ def oxazolidinones(only_sir_columns = False, *args, **kwargs):
 def penicillins(only_sir_columns = False, *args, **kwargs):
     """See our website of the R package for the manual: https://msberends.github.io/AMR/index.html"""
     return convert_to_python(amr_r.penicillins(only_sir_columns = False, *args, **kwargs))
+def phenicols(only_sir_columns = False, *args, **kwargs):
+    """See our website of the R package for the manual: https://msberends.github.io/AMR/index.html"""
+    return convert_to_python(amr_r.phenicols(only_sir_columns = False, *args, **kwargs))
 def polymyxins(only_sir_columns = False, *args, **kwargs):
     """See our website of the R package for the manual: https://msberends.github.io/AMR/index.html"""
     return convert_to_python(amr_r.polymyxins(only_sir_columns = False, *args, **kwargs))

PythonPackage/AMR/setup.py

@@ -2,7 +2,7 @@ from setuptools import setup, find_packages
 
 setup(
     name='AMR',
-    version='2.1.1.9122',
+    version='2.1.1.9123',
     packages=find_packages(),
     install_requires=[
         'rpy2',