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(v2.1.1.9215) python token

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dr. M.S. (Matthijs) Berends 2025-03-16 18:50:37 +01:00
parent a092eb3ce3
commit 1f35ff2b0b
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5 changed files with 10 additions and 10 deletions
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8
.github/workflows/check-current-testthat.yaml vendored
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@ -98,9 +98,9 @@ jobs:
- uses: actions/upload-artifact@v4
with:
name: testthat-snapshots
name: 'AMR-{matrix.config.os}-r{matrix.config.r}-result'
path: |
/Users/runner/work/AMR/AMR/check/*[.](zip|gz)
/Users/runner/work/AMR/AMR/check/**/*[.](zip|gz)
/Users/runner/work/AMR/AMR/check/**/**/*[.](zip|gz)
/Users/runner/work/AMR/AMR/check/*.(zip|gz)
/Users/runner/work/AMR/AMR/check/**/*.(zip|gz)
/Users/runner/work/AMR/AMR/check/**/**/*.(zip|gz)
if-no-files-found: warn

6
.github/workflows/publish-to-pypi.yml vendored
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@ -39,7 +39,7 @@ jobs:
runs-on: ubuntu-latest
env:
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
PyPI_TOKEN: ${{ secrets.PyPI }}
steps:
- name: Checkout code
@ -85,7 +85,7 @@ jobs:
rm -rf PythonPackage
git init
git remote add origin https://$GITHUB_PAT@github.com/msberends/AMR
git remote add origin https://$PyPI_TOKEN@github.com/msberends/AMR
git checkout --orphan python-wrapper
git config user.name "github-actions[bot]"
git config user.email "github-actions[bot]@users.noreply.github.com"
@ -94,4 +94,4 @@ jobs:
git add .
git commit -m "Python wrapper update"
# git push origin python-wrapper --force
git push https://$GITHUB_PAT@github.com/msberends/AMR.git python-wrapper --force
git push https://$PyPI_TOKEN@github.com/msberends/AMR.git python-wrapper --force

2
DESCRIPTION
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@ -1,5 +1,5 @@
Package: AMR
Version: 2.1.1.9214
Version: 2.1.1.9215
Date: 2025-03-16
Title: Antimicrobial Resistance Data Analysis
Description: Functions to simplify and standardise antimicrobial resistance (AMR)

2
NEWS.md
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@ -1,4 +1,4 @@
# AMR 2.1.1.9214
# AMR 2.1.1.9215
*(this beta version will eventually become v3.0. We're happy to reach a new major milestone soon, which will be all about the new One Health support! Install this beta using [the instructions here](https://msberends.github.io/AMR/#latest-development-version).)*

2
data-raw/gpt_training_text_v2.1.1.9214.txt → data-raw/gpt_training_text_v2.1.1.9215.txt
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@ -1,6 +1,6 @@
This knowledge base contains all context you must know about the AMR package for R. You are a GPT trained to be an assistant for the AMR package in R. You are an incredible R specialist, especially trained in this package and in the tidyverse.
First and foremost, you are trained on version 2.1.1.9214. Remember this whenever someone asks which AMR package version you’re at.
First and foremost, you are trained on version 2.1.1.9215. Remember this whenever someone asks which AMR package version you’re at.
Below are the contents of the NAMESPACE file, the index.md file, and all the man/*.Rd files (documentation) in the package. Every file content is split using 100 hypens.
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