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(v2.1.1.9215) python token

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dr. M.S. (Matthijs) Berends 2025-03-16 18:50:37 +01:00
parent a092eb3ce3
commit 1f35ff2b0b
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5 changed files with 10 additions and 10 deletions
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8
.github/workflows/check-current-testthat.yaml vendored
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@ -98,9 +98,9 @@ jobs:
- uses: actions/upload-artifact@v4 - uses: actions/upload-artifact@v4
with: with:
name: testthat-snapshots name: 'AMR-{matrix.config.os}-r{matrix.config.r}-result'
path: | path: |
/Users/runner/work/AMR/AMR/check/*[.](zip|gz) /Users/runner/work/AMR/AMR/check/*.(zip|gz)
/Users/runner/work/AMR/AMR/check/**/*[.](zip|gz) /Users/runner/work/AMR/AMR/check/**/*.(zip|gz)
/Users/runner/work/AMR/AMR/check/**/**/*[.](zip|gz) /Users/runner/work/AMR/AMR/check/**/**/*.(zip|gz)
if-no-files-found: warn if-no-files-found: warn

6
.github/workflows/publish-to-pypi.yml vendored
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@ -39,7 +39,7 @@ jobs:
runs-on: ubuntu-latest runs-on: ubuntu-latest
env: env:
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} PyPI_TOKEN: ${{ secrets.PyPI }}
steps: steps:
- name: Checkout code - name: Checkout code
@ -85,7 +85,7 @@ jobs:
rm -rf PythonPackage rm -rf PythonPackage
git init git init
git remote add origin https://$GITHUB_PAT@github.com/msberends/AMR git remote add origin https://$PyPI_TOKEN@github.com/msberends/AMR
git checkout --orphan python-wrapper git checkout --orphan python-wrapper
git config user.name "github-actions[bot]" git config user.name "github-actions[bot]"
git config user.email "github-actions[bot]@users.noreply.github.com" git config user.email "github-actions[bot]@users.noreply.github.com"
@ -94,4 +94,4 @@ jobs:
git add . git add .
git commit -m "Python wrapper update" git commit -m "Python wrapper update"
# git push origin python-wrapper --force # git push origin python-wrapper --force
git push https://$GITHUB_PAT@github.com/msberends/AMR.git python-wrapper --force git push https://$PyPI_TOKEN@github.com/msberends/AMR.git python-wrapper --force

2
DESCRIPTION
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@ -1,5 +1,5 @@
Package: AMR Package: AMR
Version: 2.1.1.9214 Version: 2.1.1.9215
Date: 2025-03-16 Date: 2025-03-16
Title: Antimicrobial Resistance Data Analysis Title: Antimicrobial Resistance Data Analysis
Description: Functions to simplify and standardise antimicrobial resistance (AMR) Description: Functions to simplify and standardise antimicrobial resistance (AMR)

2
NEWS.md
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@ -1,4 +1,4 @@
# AMR 2.1.1.9214 # AMR 2.1.1.9215
*(this beta version will eventually become v3.0. We're happy to reach a new major milestone soon, which will be all about the new One Health support! Install this beta using [the instructions here](https://msberends.github.io/AMR/#latest-development-version).)* *(this beta version will eventually become v3.0. We're happy to reach a new major milestone soon, which will be all about the new One Health support! Install this beta using [the instructions here](https://msberends.github.io/AMR/#latest-development-version).)*

2
data-raw/gpt_training_text_v2.1.1.9214.txt → data-raw/gpt_training_text_v2.1.1.9215.txt
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@ -1,6 +1,6 @@
This knowledge base contains all context you must know about the AMR package for R. You are a GPT trained to be an assistant for the AMR package in R. You are an incredible R specialist, especially trained in this package and in the tidyverse. This knowledge base contains all context you must know about the AMR package for R. You are a GPT trained to be an assistant for the AMR package in R. You are an incredible R specialist, especially trained in this package and in the tidyverse.
First and foremost, you are trained on version 2.1.1.9214. Remember this whenever someone asks which AMR package version you’re at. First and foremost, you are trained on version 2.1.1.9215. Remember this whenever someone asks which AMR package version you’re at.
Below are the contents of the NAMESPACE file, the index.md file, and all the man/*.Rd files (documentation) in the package. Every file content is split using 100 hypens. Below are the contents of the NAMESPACE file, the index.md file, and all the man/*.Rd files (documentation) in the package. Every file content is split using 100 hypens.
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