mirror of
https://github.com/msberends/AMR.git
synced 2025-07-10 00:23:03 +02:00
Built site for AMR: 1.8.2.9139@c2cfc5e
This commit is contained in:
github-actions
@ -10,7 +10,7 @@
|
||||
|
||||
<a class="navbar-brand me-2" href="../index.html">AMR (for R)</a>
|
||||
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">1.8.2.9138</small>
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">1.8.2.9139</small>
|
||||
|
||||
|
||||
<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
|
||||
@ -193,44 +193,42 @@
|
||||
<h2 id="ref-examples">Examples<a class="anchor" aria-label="anchor" href="#ref-examples"></a></h2>
|
||||
<div class="sourceCode"><pre class="sourceCode r"><code><span class="r-in"><span><span class="fu">random_mic</span><span class="op">(</span><span class="fl">25</span><span class="op">)</span></span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> Class 'mic'</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 0.002 0.001 0.5 0.5 0.01 8 0.0625 0.125 0.025 32 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [11] 16 0.25 0.0625 0.025 0.01 >=128 4 64 >=128 0.125 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [21] 4 0.005 >=128 0.0625 0.5 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] >=256 32 <=0.001 32 1 0.005 0.5 4 0.0625 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [10] 128 >=256 >=256 8 0.125 8 0.002 1 0.005 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [19] 128 0.25 0.025 8 <=0.001 <=0.001 16 </span>
|
||||
<span class="r-in"><span><span class="fu">random_disk</span><span class="op">(</span><span class="fl">25</span><span class="op">)</span></span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> Class 'disk'</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 47 50 29 8 33 45 24 41 40 50 48 33 41 8 8 46 26 48 11 13 17 8 26 29 15</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 18 7 50 40 43 33 21 21 43 17 40 46 46 9 14 13 27 14 17 18 42 19 19 30 36</span>
|
||||
<span class="r-in"><span><span class="fu">random_sir</span><span class="op">(</span><span class="fl">25</span><span class="op">)</span></span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> Class 'sir'</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] I S R S I R S R S I S R S S S I I R I S S S I S S</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] R R S R S R S S I I I S R I S S R I I R I I S R R</span>
|
||||
<span class="r-in"><span></span></span>
|
||||
<span class="r-in"><span><span class="co"># \donttest{</span></span></span>
|
||||
<span class="r-in"><span><span class="co"># make the random generation more realistic by setting a bug and/or drug:</span></span></span>
|
||||
<span class="r-in"><span><span class="fu">random_mic</span><span class="op">(</span><span class="fl">25</span>, <span class="st">"Klebsiella pneumoniae"</span><span class="op">)</span> <span class="co"># range 0.0625-64</span></span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> Class 'mic'</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] <=0.001 <=0.001 0.005 0.005 0.5 0.002 0.125 16 1 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [10] 4 8 16 64 0.0625 4 64 64 0.01 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [19] 0.002 8 1 0.0625 0.0625 2 1 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 1 0.25 32 32 0.25 0.002 0.25 16 0.125 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [10] 0.5 16 <=0.001 4 2 0.005 0.5 0.025 8 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [19] 2 64 32 0.5 0.005 <=0.001 0.0625 </span>
|
||||
<span class="r-in"><span><span class="fu">random_mic</span><span class="op">(</span><span class="fl">25</span>, <span class="st">"Klebsiella pneumoniae"</span>, <span class="st">"meropenem"</span><span class="op">)</span> <span class="co"># range 0.0625-16</span></span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> Class 'mic'</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 4 16 <=0.5 4 32 4 4 16 16 <=0.5 32 <=0.5</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [13] 8 16 32 <=0.5 <=0.5 64 16 8 <=0.5 1 4 8 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [25] 64 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 1 2 0.25 0.5 1 1 0.5 0.5 0.5 16 1 1 0.5 0.5 1 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [16] 16 1 16 0.5 2 4 8 4 1 1 </span>
|
||||
<span class="r-in"><span><span class="fu">random_mic</span><span class="op">(</span><span class="fl">25</span>, <span class="st">"Streptococcus pneumoniae"</span>, <span class="st">"meropenem"</span><span class="op">)</span> <span class="co"># range 0.0625-4</span></span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> Class 'mic'</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 1 4 4 2 1 2 0.25 <=0.0625</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [9] 4 1 0.125 1 0.125 4 0.125 <=0.0625</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [17] 0.125 2 0.125 >=8 4 2 0.5 0.5 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [25] >=8 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] <=0.025 1 0.25 <=0.025 0.0625 <=0.025 0.125 >=4 >=4 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [10] 1 1 1 1 <=0.025 0.25 1 0.0625 0.25 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [19] 0.125 <=0.025 0.125 0.125 >=4 0.25 >=4 </span>
|
||||
<span class="r-in"><span></span></span>
|
||||
<span class="r-in"><span><span class="fu">random_disk</span><span class="op">(</span><span class="fl">25</span>, <span class="st">"Klebsiella pneumoniae"</span><span class="op">)</span> <span class="co"># range 8-50</span></span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> Class 'disk'</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 48 8 8 30 49 17 48 32 32 43 43 28 21 43 27 42 46 22 49 41 30 33 45 36 18</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 47 39 14 30 49 29 13 31 35 41 11 42 18 34 35 22 36 14 48 40 41 46 12 32 34</span>
|
||||
<span class="r-in"><span><span class="fu">random_disk</span><span class="op">(</span><span class="fl">25</span>, <span class="st">"Klebsiella pneumoniae"</span>, <span class="st">"ampicillin"</span><span class="op">)</span> <span class="co"># range 11-17</span></span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> Class 'disk'</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 14 16 12 12 11 15 16 16 13 14 13 12 16 17 12 17 11 14 11 17 14 12 11 14 11</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 13 11 17 11 14 12 13 16 12 13 11 11 15 15 15 17 11 11 16 12 12 16 14 11 17</span>
|
||||
<span class="r-in"><span><span class="fu">random_disk</span><span class="op">(</span><span class="fl">25</span>, <span class="st">"Streptococcus pneumoniae"</span>, <span class="st">"ampicillin"</span><span class="op">)</span> <span class="co"># range 12-27</span></span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> Class 'disk'</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 24 17 20 17 26 27 26 19 18 21 24 19 19 27 23 17 17 21 24 16 18 21 18 26 19</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 15 19 16 23 16 27 15 20 27 21 26 20 20 27 22 26 19 26 19 26 23 23 16 17 24</span>
|
||||
<span class="r-in"><span><span class="co"># }</span></span></span>
|
||||
</code></pre></div>
|
||||
</div>
|
||||
|
||||
Reference in New Issue
Block a user