mirror of
https://github.com/msberends/AMR.git
synced 2025-09-02 19:44:04 +02:00
Built site for AMR@2.1.1.9133: 9520977
This commit is contained in:
github-actions
@@ -7,7 +7,7 @@
|
||||
|
||||
<a class="navbar-brand me-2" href="../index.html">AMR (for R)</a>
|
||||
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9125</small>
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9133</small>
|
||||
|
||||
|
||||
<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
|
||||
@@ -99,43 +99,43 @@
|
||||
<h2 id="ref-examples">Examples<a class="anchor" aria-label="anchor" href="#ref-examples"></a></h2>
|
||||
<div class="sourceCode"><pre class="sourceCode r"><code><span class="r-in"><span><span class="fu">random_mic</span><span class="op">(</span><span class="fl">25</span><span class="op">)</span></span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> Class 'mic'</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 0.025 8 0.002 0.005 0.25 >=256 0.01 0.002 64 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [10] 0.5 4 32 0.002 16 >=256 0.01 0.002 0.0625 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [19] 0.002 64 8 8 2 <=0.001 0.125 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 1 16 4 0.125 4 0.005 0.001 0.01 >=128 32 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [11] 16 0.001 64 64 0.125 0.001 64 0.0625 0.002 0.005 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [21] 64 2 0.25 0.01 1 </span>
|
||||
<span class="r-in"><span><span class="fu">random_disk</span><span class="op">(</span><span class="fl">25</span><span class="op">)</span></span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> Class 'disk'</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 43 7 48 40 19 50 50 20 44 14 16 33 31 17 30 6 38 7 6 12 16 11 43 43 45</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 28 21 50 8 29 44 46 42 24 6 41 19 39 48 19 18 49 7 15 36 50 50 48 8 35</span>
|
||||
<span class="r-in"><span><span class="fu">random_sir</span><span class="op">(</span><span class="fl">25</span><span class="op">)</span></span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> Class 'sir'</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] R S R R S S R I S R S S R I I R S I R R R R I R S</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] I I I I R S I I R I R S I R I I R R I S S I I S R</span>
|
||||
<span class="r-in"><span></span></span>
|
||||
<span class="r-in"><span><span class="co"># \donttest{</span></span></span>
|
||||
<span class="r-in"><span><span class="co"># make the random generation more realistic by setting a bug and/or drug:</span></span></span>
|
||||
<span class="r-in"><span><span class="fu">random_mic</span><span class="op">(</span><span class="fl">25</span>, <span class="st">"Klebsiella pneumoniae"</span><span class="op">)</span> <span class="co"># range 0.0625-64</span></span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> Class 'mic'</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 0.025 0.25 16 8 0.001 4 16 0.025 0.25 8 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [11] 0.5 0.005 0.0625 2 0.125 0.002 1 16 16 0.005 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [21] 0.001 >=32 0.002 0.0625 0.125 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 0.0625 16 0.025 4 32 0.025 0.002 0.0625 2 0.25 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [11] 0.0625 0.125 0.001 16 0.001 1 0.25 0.5 64 0.005 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [21] 4 4 0.125 0.002 0.5 </span>
|
||||
<span class="r-in"><span><span class="fu">random_mic</span><span class="op">(</span><span class="fl">25</span>, <span class="st">"Klebsiella pneumoniae"</span>, <span class="st">"meropenem"</span><span class="op">)</span> <span class="co"># range 0.0625-16</span></span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> Class 'mic'</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 4 8 2 8 8 16 8 8 1 0.5 1 >=32 2 4 1 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [16] >=32 4 2 4 4 2 16 4 16 2 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] >=16 0.5 8 8 4 >=16 1 1 4 1 8 4 >=16 4 0.5 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [16] 1 >=16 4 2 2 4 2 8 0.5 1 </span>
|
||||
<span class="r-in"><span><span class="fu">random_mic</span><span class="op">(</span><span class="fl">25</span>, <span class="st">"Streptococcus pneumoniae"</span>, <span class="st">"meropenem"</span><span class="op">)</span> <span class="co"># range 0.0625-4</span></span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> Class 'mic'</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] <=0.0625 <=0.0625 <=0.0625 0.5 0.125 0.25 0.5 2 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [9] 0.125 0.125 0.5 4 <=0.0625 2 0.25 4 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [17] 2 0.25 1 2 2 <=0.0625 2 <=0.0625</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [25] 0.5 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] >=8 4 2 <=0.0625 0.25 1 1 0.25 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [9] <=0.0625 0.25 0.5 1 >=8 1 2 <=0.0625</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [17] >=8 <=0.0625 1 1 1 4 0.125 0.125 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [25] 2 </span>
|
||||
<span class="r-in"><span></span></span>
|
||||
<span class="r-in"><span><span class="fu">random_disk</span><span class="op">(</span><span class="fl">25</span>, <span class="st">"Klebsiella pneumoniae"</span><span class="op">)</span> <span class="co"># range 8-50</span></span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> Class 'disk'</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 30 43 22 49 40 8 14 36 49 23 12 9 17 25 43 46 30 49 34 22 50 24 39 38 46</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 15 46 20 39 24 36 50 42 15 12 11 17 40 16 46 44 48 50 24 50 29 14 39 43 14</span>
|
||||
<span class="r-in"><span><span class="fu">random_disk</span><span class="op">(</span><span class="fl">25</span>, <span class="st">"Klebsiella pneumoniae"</span>, <span class="st">"ampicillin"</span><span class="op">)</span> <span class="co"># range 11-17</span></span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> Class 'disk'</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 17 15 16 14 17 14 12 13 13 17 17 12 14 16 15 14 16 14 16 13 11 16 17 13 13</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 16 11 11 13 11 16 17 16 11 11 14 11 11 14 16 14 16 12 12 13 14 13 17 12 11</span>
|
||||
<span class="r-in"><span><span class="fu">random_disk</span><span class="op">(</span><span class="fl">25</span>, <span class="st">"Streptococcus pneumoniae"</span>, <span class="st">"ampicillin"</span><span class="op">)</span> <span class="co"># range 12-27</span></span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> Class 'disk'</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 25 22 21 23 19 20 21 25 20 19 21 19 27 22 26 25 27 21 17 26 18 23 23 26 27</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 25 16 23 19 25 20 24 17 27 16 18 17 18 20 19 24 20 23 23 20 19 25 23 17 16</span>
|
||||
<span class="r-in"><span><span class="co"># }</span></span></span>
|
||||
</code></pre></div>
|
||||
</div>
|
||||
|
||||
Reference in New Issue
Block a user