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(v1.4.0.9033) documentation update
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<script src="../extra.js"></script>
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<meta property="og:title" content="Antibiotic class selectors — antibiotic_class_selectors" />
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<meta property="og:description" content="Use these selection helpers inside any function that allows Tidyverse selection helpers, like dplyr::select() or tidyr::pivot_longer(). They help to select the columns of antibiotics that are of a specific antibiotic class, without the need to define the columns or antibiotic abbreviations." />
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<meta property="og:description" content="Use these selection helpers inside any function that allows Tidyverse selection helpers, such as select() and pivot_longer(). They help to select the columns of antibiotics that are of a specific antibiotic class, without the need to define the columns or antibiotic abbreviations." />
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<meta property="og:image" content="https://msberends.github.io/AMR/logo.png" />
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</button>
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<span class="navbar-brand">
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<a class="navbar-link" href="../index.html">AMR (for R)</a>
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<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Latest development version">1.4.0.9030</span>
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<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Latest development version">1.4.0.9032</span>
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</span>
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</div>
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</div>
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<div class="ref-description">
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<p>Use these selection helpers inside any function that allows <a href='https://tidyselect.r-lib.org/reference/language.html'>Tidyverse selection helpers</a>, like <code><a href='https://dplyr.tidyverse.org/reference/select.html'>dplyr::select()</a></code> or <code><a href='https://tidyr.tidyverse.org/reference/pivot_longer.html'>tidyr::pivot_longer()</a></code>. They help to select the columns of antibiotics that are of a specific antibiotic class, without the need to define the columns or antibiotic abbreviations.</p>
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<p>Use these selection helpers inside any function that allows <a href='https://tidyselect.r-lib.org/reference/language.html'>Tidyverse selection helpers</a>, such as <code><a href='https://dplyr.tidyverse.org/reference/select.html'>select()</a></code> and <code><a href='https://tidyr.tidyverse.org/reference/pivot_longer.html'>pivot_longer()</a></code>. They help to select the columns of antibiotics that are of a specific antibiotic class, without the need to define the columns or antibiotic abbreviations.</p>
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</div>
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<pre class="usage"><span class='fu'>ab_class</span><span class='op'>(</span><span class='va'>ab_class</span><span class='op'>)</span>
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<h2 class="hasAnchor" id="details"><a class="anchor" href="#details"></a>Details</h2>
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<p>All columns will be searched for known antibiotic names, abbreviations, brand names and codes (ATC, EARS-Net, WHO, etc.) in the <a href='antibiotics.html'>antibiotics</a> data set. This means that a selector like e.g. <code>aminoglycosides()</code> will pick up column names like 'gen', 'genta', 'J01GB03', 'tobra', 'Tobracin', etc.</p>
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<p><strong>N.B. These functions only work if the <code>tidyselect</code> package is installed</strong>, that comes with the <code>dplyr</code> package. An error will be thrown if the <code>tidyselect</code> package is not installed, or if the functions are used outside a function that allows Tidyverse selections like <code><a href='https://dplyr.tidyverse.org/reference/select.html'>select()</a></code> or <code>pivot_longer()</code>.</p>
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<p><strong>N.B. These functions require the <code>tidyselect</code> package to be installed</strong>, that comes with the <code>dplyr</code> package. An error will be thrown if the <code>tidyselect</code> package is not installed, or if the functions are used outside a function that allows <a href='https://tidyselect.r-lib.org/reference/language.html'>Tidyverse selection helpers</a> such as <code><a href='https://dplyr.tidyverse.org/reference/select.html'>select()</a></code> and <code><a href='https://tidyr.tidyverse.org/reference/pivot_longer.html'>pivot_longer()</a></code>`.</p>
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<h2 class="hasAnchor" id="reference-data-publicly-available"><a class="anchor" href="#reference-data-publicly-available"></a>Reference data publicly available</h2>
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