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(v2.1.1.9047) unit test and index

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dr. M.S. (Matthijs) Berends
2024-06-13 07:37:53 +02:00
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index.md
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* Generates **antibiograms** - traditional, combined, syndromic, and even WISCA
* Provides the **full microbiological taxonomy** and extensive info on **all antimicrobial drugs**
* Applies all recent **CLSI** and **EUCAST** clinical and veterinary breakpoints for MICs and disk zones
* Corrects for duplicate isolates using 4 methods, **calculates** and **predicts** AMR per antibiotic class
* Corrects for duplicate isolates, **calculates** and **predicts** AMR per antibiotic class
* Integrates with **WHONET**, ATC, **EARS-Net**, PubChem, **LOINC**, **SNOMED CT**, and **NCBI**
* 100% free of costs and dependencies, highly suitable for places with **limited resources**
* **Easy to use** and **easy to learn**, with a **community** of contributors from around the globe
<div style="display: flex; font-size: 0.8em;">
<p style="text-align:left; width: 50%;"><small><a href="https://msberends.github.io/AMR/">https://msberends.github.io/AMR</a></small></p>
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#### Latest development version
[![check-recent](https://github.com/msberends/AMR/workflows/check-old/badge.svg?branch=main)](https://codecov.io/gh/msberends/AMR?branch=main)
[![check-recent](https://github.com/msberends/AMR/workflows/check-recent/badge.svg?branch=main)](https://codecov.io/gh/msberends/AMR?branch=main)
[![check-old](https://github.com/msberends/AMR/actions/workflows/check-old.yaml/badge.svg?branch=main)](https://github.com/msberends/AMR/actions/workflows/check-old.yaml?query=branch%3Amain)
[![check-recent](https://github.com/msberends/AMR/actions/workflows/check-recent.yaml/badge.svg?branch=main)](https://github.com/msberends/AMR/actions/workflows/check-recent.yaml?query=branch%3Amain)
[![CodeFactor](https://www.codefactor.io/repository/github/msberends/amr/badge)](https://www.codefactor.io/repository/github/msberends/amr)
[![Codecov](https://codecov.io/gh/msberends/AMR/branch/main/graph/badge.svg)](https://codecov.io/gh/msberends/AMR?branch=main)