prehook

.github/prehooks/pre-commit

@@ -37,7 +37,7 @@ if command -v Rscript > /dev/null; then
     Rscript -e "source('data-raw/_pre_commit_hook.R')"
     currentpkg=$(Rscript -e "cat(pkgload::pkg_name())")
     echo "- Adding changed files in ./data-raw and ./man to this commit"
-    git add data-raw/* --ignore-missing
+    git add data-raw/*
     git add man/*
     git add R/sysdata.rda
     git add NAMESPACE

.gitignore

@@ -25,4 +25,4 @@ data-raw/DSMZ_bactnames.xlsx
 data-raw/country_analysis_url_token.R
 data-raw/country_analysis2.R
 data-raw/taxonomy.csv
-data-raw/WHONET
+data-raw/WHONET/*

DESCRIPTION

@@ -1,5 +1,5 @@
 Package: AMR
-Version: 1.8.2.9136
+Version: 1.8.2.9137
 Date: 2023-02-18
 Title: Antimicrobial Resistance Data Analysis
 Description: Functions to simplify and standardise antimicrobial resistance (AMR)

NEWS.md

@@ -1,4 +1,4 @@
-# AMR 1.8.2.9136
+# AMR 1.8.2.9137
 
 *(this beta version will eventually become v2.0! We're happy to reach a new major milestone soon!)*