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(v3.0.0.9023) update todo tracker

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dr. M.S. (Matthijs) Berends
2025-09-04 14:04:22 +02:00
parent 3ba1b8a10a
commit 3d40b20c10
3 changed files with 10 additions and 6 deletions
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10
.github/workflows/todo-tracker.yml vendored
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@@ -43,9 +43,9 @@ jobs:
- name: Generate TODO list from R/ - name: Generate TODO list from R/
run: | run: |
echo "## TODO Report" > todo.md echo "## \`TODO\` Report" > todo.md
echo "" >> todo.md echo "" >> todo.md
echo "_This issue is automatically updated on each push to `main`._" >> todo.md echo "_This overview is automatically updated on each push to \`main\`. It provides an automated overview of all mentions of the text \`TODO\`._" >> todo.md
echo "" >> todo.md echo "" >> todo.md
todos=$(find R/ -type f ! -name "sysdata.rda" -exec grep -nH "TODO" {} + || true) todos=$(find R/ -type f ! -name "sysdata.rda" -exec grep -nH "TODO" {} + || true)
if [ -z "$todos" ]; then if [ -z "$todos" ]; then
@@ -57,13 +57,16 @@ jobs:
line = $2 line = $2
text = substr($0, index($0,$3)) text = substr($0, index($0,$3))
if (file != last_file) { if (file != last_file) {
if (last_file != "") print "" if (last_file != "") print "```"
print ""
print "### " file print "### " file
print "```r"
last_file = file last_file = file
} }
printf "L%s: %s\n", line, text printf "L%s: %s\n", line, text
} }
' >> todo.md ' >> todo.md
echo "\`\`\`" >> todo.md
fi fi
- name: Update GitHub issue - name: Update GitHub issue
@@ -71,5 +74,6 @@ jobs:
with: with:
token: ${{ secrets.GH_REPO_SCOPE }} token: ${{ secrets.GH_REPO_SCOPE }}
issue-number: 231 issue-number: 231
comment-id: 3379846566
body-file: todo.md body-file: todo.md
edit-mode: replace edit-mode: replace

4
DESCRIPTION
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@@ -1,6 +1,6 @@
Package: AMR Package: AMR
Version: 3.0.0.9022 Version: 3.0.0.9023
Date: 2025-09-03 Date: 2025-09-04
Title: Antimicrobial Resistance Data Analysis Title: Antimicrobial Resistance Data Analysis
Description: Functions to simplify and standardise antimicrobial resistance (AMR) Description: Functions to simplify and standardise antimicrobial resistance (AMR)
data analysis and to work with microbial and antimicrobial properties by data analysis and to work with microbial and antimicrobial properties by

2
NEWS.md
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@@ -1,4 +1,4 @@
# AMR 3.0.0.9022 # AMR 3.0.0.9023
This is a bugfix release following the release of v3.0.0 in June 2025. This is a bugfix release following the release of v3.0.0 in June 2025.