unit test fix

.github/workflows/check-devel.yaml

@@ -36,7 +36,7 @@ on:
   schedule:
     # run a schedule everyday at 1 AM.
     # this is to check that all dependencies are still available (see R/zzz.R)
-    cron:  '0 1 * * *'
+    - cron:  '0 1 * * *'
 
 name: check-devel
 

.github/workflows/check-release.yaml

@@ -34,7 +34,7 @@ on:
   schedule:
     # run a schedule everyday at 1 AM.
     # this is to check that all dependencies are still available (see R/zzz.R)
-    cron:  '0 1 * * *'
+    - cron:  '0 1 * * *'
 
 name: check-release
 

DESCRIPTION

@@ -1,5 +1,5 @@
 Package: AMR
-Version: 1.8.2.9019
+Version: 1.8.2.9020
 Date: 2022-10-18
 Title: Antimicrobial Resistance Data Analysis
 Description: Functions to simplify and standardise antimicrobial resistance (AMR)

NEWS.md

@@ -1,4 +1,4 @@
-# AMR 1.8.2.9019
+# AMR 1.8.2.9020
 
 This version will eventually become v2.0! We're happy to reach a new major milestone soon!
 

R/add_custom_antimicrobials.R

@@ -124,7 +124,7 @@ add_custom_antimicrobials <- function(x) {
     }
     for (col in colnames(x)) {
       # assign new values
-      new_df[, col] <-  x[, col, drop = TRUE]
+      new_df[, col] <- x[, col, drop = TRUE]
     }
     AMR_env$AB_lookup <- unique(rbind(AMR_env$AB_lookup, new_df))
   } else {