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speed improvement eucast_rules(), support more old MO codes

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This commit is contained in:
dr. M.S. (Matthijs) Berends
2019-05-20 12:00:18 +02:00
parent b0033dae1b
commit 4ca00e1868
35 changed files with 590 additions and 683 deletions
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3
vignettes/AMR.Rmd
View File

@ -16,8 +16,9 @@ editor_options:
```{r setup, include = FALSE, results = 'markup'}
knitr::opts_chunk$set(
warning = FALSE,
collapse = TRUE,
comment = "#>",
comment = "#",
fig.width = 7.5,
fig.height = 5
)

2
vignettes/EUCAST.Rmd
View File

@ -17,7 +17,7 @@ editor_options:
```{r setup, include = FALSE, results = 'markup'}
knitr::opts_chunk$set(
collapse = TRUE,
comment = "#>",
comment = "#",
fig.width = 7.5,
fig.height = 4.5
)

2
vignettes/SPSS.Rmd
View File

@ -16,7 +16,7 @@ editor_options:
```{r setup, include = FALSE, results = 'markup'}
knitr::opts_chunk$set(
collapse = TRUE,
comment = "#>"
comment = "#"
)
# set to original language (English)
Sys.setlocale(locale = "C")

2
vignettes/ab_property.Rmd
View File

@ -16,7 +16,7 @@ editor_options:
```{r setup, include = FALSE, results = 'markup'}
knitr::opts_chunk$set(
collapse = TRUE,
comment = "#>"
comment = "#"
)
# set to original language (English)
Sys.setlocale(locale = "C")

2
vignettes/benchmarks.Rmd
View File

@ -17,7 +17,7 @@ editor_options:
```{r setup, include = FALSE, results = 'markup'}
knitr::opts_chunk$set(
collapse = TRUE,
comment = "#>",
comment = "#",
fig.width = 7.5,
fig.height = 4.5
)

2
vignettes/mo_property.Rmd
View File

@ -16,7 +16,7 @@ editor_options:
```{r setup, include = FALSE, results = 'markup'}
knitr::opts_chunk$set(
collapse = TRUE,
comment = "#>"
comment = "#"
)
# set to original language (English)
Sys.setlocale(locale = "C")

2
vignettes/resistance_predict.Rmd
View File

@ -16,7 +16,7 @@ editor_options:
```{r setup, include = FALSE, results = 'markup'}
knitr::opts_chunk$set(
collapse = TRUE,
comment = "#>",
comment = "#",
fig.width = 7.5,
fig.height = 4.75
)