(v3.0.0.9027) skimr update and as.ab warning - fixes #234, fixes #232

2025-09-15 15:09:41 +02:00 · 2025-09-10 13:32:52 +02:00
parent d5a568318b
commit 4d7c4ca52c
13 changed files with 92 additions and 58 deletions
--- a/tests/testthat/test-ab.R
+++ b/tests/testthat/test-ab.R
@@ -96,6 +96,14 @@ test_that("test-ab.R", {
    rep("GEH", 8)
  )

+  # skimr
+  if (AMR:::pkg_is_available("skimr", min_version = "2.0.0", also_load = TRUE)) {
+    expect_named(
+      skim(clinical_breakpoints$ab),
+      c("skim_type", "skim_variable", "n_missing", "complete_rate", "ab.n_unique", "ab.top_ab", "ab.top_ab_name", "ab.top_group")
+    )
+  }
+
  # assigning and subsetting
  x <- AMR::antimicrobials$ab
  expect_inherits(x[1], "ab")